OLONG_017780 (Oryza longistaminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OLONG_017780 T003359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.712 0.920
Q84JE9_HORVU
M09718_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01 		0.712 0.920
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.682 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_017780-R1 AP2 87 138

Links

Other AP2 family TFs
Other Oryza longistaminata TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I
DREB2D Arabidopsis thaliana AT1G75490 D
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I
Bo2g083920 Brassica oleracea Bo2g083920 I
Bo6g086320 Brassica oleracea Bo6g086320 I
Bo6g119660 Brassica oleracea Bo6g119660 I
Bra003752 Brassica rapa Bra003752 I
Bra008200 Brassica rapa Bra008200 I
Bra015840 Brassica rapa Bra015840 I
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I
Carubv10020960m.g Capsella rubella Carubv10020960m.g I
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I
Ca_10770 Cicer arietinum Ca_10770 I
Cla021113 Citrullus lanatus Cla021113 I
Cla022803 Citrullus lanatus Cla022803 I
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I
Cucsa.342750 Cucumis sativus Cucsa.342750 I
Cucsa.231820 Cucumis sativus Cucsa.231820 I
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I
GLYMA17G37350 Glycine max GLYMA17G37350 I
GLYMA04G03070 Glycine max GLYMA04G03070 I
GLYMA06G03110 Glycine max GLYMA06G03110 I
GLYMA14G07620 Glycine max GLYMA14G07620 I
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I
LPERR08G20650 Leersia perrieri LPERR08G20650 I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I
MDP0000295902 Malus domestica MDP0000295902 I
MDP0000250927 Malus domestica MDP0000250927 I
MDP0000250924 Malus domestica MDP0000250924 I
MDP0000141335 Malus domestica MDP0000141335 I
cassava45031.m1 Manihot esculenta cassava45031.m1 I
cassava41240.m1 Manihot esculenta cassava41240.m1 I
cassava25887.m1 Manihot esculenta cassava25887.m1 I
MTR_1g023170 Medicago truncatula MTR_1g023170 I
MTR_3g112440 Medicago truncatula MTR_3g112440 I
mgf024545m Mimulus guttatus mgf024545m I
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I
Pm006274 Prunus mume Pm006274 I
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I
30170.m014115 Ricinus communis 30170.m014115 I
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I
TCM_026121 Theobroma cacao TCM_026121 I
TCM_034132 Theobroma cacao TCM_034132 I
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I