Eucgr.F04380 (Eucalyptus grandis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Eucgr.F04380 T023058_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F04380.1 B3 94 196

Links

Other B3 family TFs
Other Eucalyptus grandis TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Cucsa.107270 Cucumis sativus Cucsa.107270 I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
Lus10003904.g Linum usitatissimum Lus10003904.g I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.000
OB02G19930 Oryza brachyantha OB02G19930 N 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
PDK_20s1767201g001 Phoenix dactylifera PDK_20s1767201g001 N 0.000
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.000