GE19372 (Drosophila yakuba)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 FBgn0236717 T039020_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.914 1.000
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.914 1.000
hlh-11
M00931_2.00 		Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT		 PBM
Grove et al.(2009)
HLH11 		0.879 0.750
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.843 0.808
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.843 0.808
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.843 0.808
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.843 0.808
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.843 0.808
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.843 0.808
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.843 0.808
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.843 0.808
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.843 0.808
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.843 0.808
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.843 0.808
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.843 0.808
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.843 0.808
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.843 0.808
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.843 0.808
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.843 0.808
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.843 0.808
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.843 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0264382 bHLH 97 148

Links

Other bHLH family TFs
Other Drosophila yakuba TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I
AMTR_s00089p00081270 Amborella trichopoda AMTR_s00089p00081270 I
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I
Aquca_014_00308 Aquilegia coerulea Aquca_014_00308 I
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I
PI Arabidopsis lyrata fgenesh2_kg.6__2063__AT5G20240.1 I
AP3 Arabidopsis thaliana AT3G54340 D
PI Arabidopsis thaliana AT5G20240 D
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I
Bostr.26527s0175 Boechera stricta Bostr.26527s0175 I
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I
Bo2g020730 Brassica oleracea Bo2g020730 I
Bo3g010390 Brassica oleracea Bo3g010390 I
Bo3g014100 Brassica oleracea Bo3g014100 I
Bo4g120010 Brassica oleracea Bo4g120010 I
Bo7g098190 Brassica oleracea Bo7g098190 I
Bo8g083600 Brassica oleracea Bo8g083600 I
Bo9g152080 Brassica oleracea Bo9g152080 I
Bra002285 Brassica rapa Bra002285 I
Bra006549 Brassica rapa Bra006549 I
Bra007067 Brassica rapa Bra007067 I
Bra012997 Brassica rapa Bra012997 I
Bra014822 Brassica rapa Bra014822 I
Bra020093 Brassica rapa Bra020093 I
Cagra.0179s0008 Capsella grandiflora Cagra.0179s0008 I
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I
Carubv10001962m.g Capsella rubella Carubv10001962m.g I
Carubv10018833m.g Capsella rubella Carubv10018833m.g I
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I
Ca_01994 Cicer arietinum Ca_01994 I
Ca_03887 Cicer arietinum Ca_03887 I
Ca_04909 Cicer arietinum Ca_04909 I
Ca_13111 Cicer arietinum Ca_13111 I
Cla021117 Citrullus lanatus Cla021117 I
Cla023547 Citrullus lanatus Cla023547 I
Ciclev10002422m.g Citrus clementina Ciclev10002422m.g I
Ciclev10002471m.g Citrus clementina Ciclev10002471m.g I
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I
orange1.1g040096m.g Citrus sinensis orange1.1g040096m.g I
orange1.1g042044m.g Citrus sinensis orange1.1g042044m.g I
Cucsa.018420 Cucumis sativus Cucsa.018420 I
Cucsa.342790 Cucumis sativus Cucsa.342790 I
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I
Thhalv10014683m.g Eutrema salsugineum Thhalv10014683m.g I
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I
GLYMA01G37470 Glycine max GLYMA01G37470 I
GLYMA04G02980 Glycine max GLYMA04G02980 I
GLYMA04G42420 Glycine max GLYMA04G42420 I
GLYMA06G02990 Glycine max GLYMA06G02990 I
GLYMA06G12380 Glycine max GLYMA06G12380 I
GLYMA11G07820 Glycine max GLYMA11G07820 I
GLYMA13G09660 Glycine max GLYMA13G09660 I
GLYMA14G24590 Glycine max GLYMA14G24590 I
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I
MLOC_31575 Hordeum vulgare MLOC_31575 I
LPERR01G34040 Leersia perrieri LPERR01G34040 I
LPERR06G22780 Leersia perrieri LPERR06G22780 I
Lus10010630.g Linum usitatissimum Lus10010630.g I
Lus10029719.g Linum usitatissimum Lus10029719.g I
Lus10031960.g Linum usitatissimum Lus10031960.g I
Lus10033187.g Linum usitatissimum Lus10033187.g I
Lus10042749.g Linum usitatissimum Lus10042749.g I
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I
MDP0000133037 Malus domestica MDP0000133037 I
MDP0000184294 Malus domestica MDP0000184294 I
MDP0000224779 Malus domestica MDP0000224779 I
MDP0000315938 Malus domestica MDP0000315938 I
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D
cassava21176.m1 Manihot esculenta cassava21176.m1 I
cassava32003.m1 Manihot esculenta cassava32003.m1 I
cassava33649.m1 Manihot esculenta cassava33649.m1 I
cassava33721.m1 Manihot esculenta cassava33721.m1 I
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I
cassava41235.m1 Manihot esculenta cassava41235.m1 I
MTR_1g029670 Medicago truncatula MTR_1g029670 I
MTR_3g088615 Medicago truncatula MTR_3g088615 I
MTR_3g113030 Medicago truncatula MTR_3g113030 I
MTR_5g021270 Medicago truncatula MTR_5g021270 I
mgf003143m Mimulus guttatus mgf003143m I
mgf006158m Mimulus guttatus mgf006158m I
mgf008207m Mimulus guttatus mgf008207m I
GSMUA_Achr5G01230_001 Musa acuminata GSMUA_Achr5G01230_001 I
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I
OBART01G39540 Oryza barthii OBART01G39540 I
OBART05G17040 Oryza barthii OBART05G17040 I
OBART06G27230 Oryza barthii OBART06G27230 I
OB01G48280 Oryza brachyantha OB01G48280 I
OB05G24910 Oryza brachyantha OB05G24910 I
OB06G35020 Oryza brachyantha OB06G35020 I
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I
ORGLA05G0147400 Oryza glaberrima ORGLA05G0147400 I
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I
BGIOSGA000377 Oryza indica BGIOSGA000377 I
BGIOSGA019900 Oryza indica BGIOSGA019900 I
BGIOSGA020546 Oryza indica BGIOSGA020546 I
OLONG_003010 Oryza longistaminata OLONG_003010 I
OLONG_004226 Oryza longistaminata OLONG_004226 I
OLONG_005253 Oryza longistaminata OLONG_005253 I
OMERI01G36400 Oryza meridionalis OMERI01G36400 I
OMERI05G14780 Oryza meridionalis OMERI05G14780 I
OMERI06G27290 Oryza meridionalis OMERI06G27290 I
ONIVA01G44390 Oryza nivara ONIVA01G44390 I
ONIVA05G17790 Oryza nivara ONIVA05G17790 I
ONIVA06G29820 Oryza nivara ONIVA06G29820 I
OPUNC01G38250 Oryza punctata OPUNC01G38250 I
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I
ORUFI05G18270 Oryza rufipogon ORUFI05G18270 I
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I
MADS2 Oryza sativa OS01G0883100 D
MADS4 Oryza sativa OS05G0423400 I
MADS16 Oryza sativa OS06G0712700 D
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I
Pavir.Ea03625 Panicum virgatum Pavir.Ea03625 I
Pavir.J11672 Panicum virgatum Pavir.J11672 I
Pavir.J19259 Panicum virgatum Pavir.J19259 I
FBP1_PETHY Petunia x hybrida FBP1_PETHY D
MADS2_PETHY Petunia x hybrida MADS2_PETHY D
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I
Pm004718 Prunus mume Pm004718 I
Pm006266 Prunus mume Pm006266 I
Pm026712 Prunus mume Pm026712 I
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I
29648.m001978 Ricinus communis 29648.m001978 I
29782.m000119 Ricinus communis 29782.m000119 I
SapurV1A.0829s0180 Salix purpurea SapurV1A.0829s0180 I
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I
Si002929m.g Setaria italica Si002929m.g I
Si007221m.g Setaria italica Si007221m.g I
Si018183m.g Setaria italica Si018183m.g I
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I
Sb03g041860 Sorghum bicolor Sb03g041860 I
Sb04g004736 Sorghum bicolor Sb04g004736 I
Sb09g020770 Sorghum bicolor Sb09g020770 I
Sb10g029810 Sorghum bicolor Sb10g029810 I
TCM_000266 Theobroma cacao TCM_000266 I
TCM_035212 Theobroma cacao TCM_035212 I
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I
TRIUR3_29719 Triticum urartu TRIUR3_29719 I
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I
AP3 Vitis vinifera VIT_18s0001g13460 I
GRMZM2G110153 Zea mays GRMZM2G110153 I
GRMZM2G139073 Zea mays GRMZM2G139073 I
M17_MAIZE Zea mays M17_MAIZE D