atf6 (Danio rerio)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSDARG00000012656 T059387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.835 0.688
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.835 0.688
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.835 0.688
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.835 0.688
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.835 0.688
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.835 0.688
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.835 0.688
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.835 0.688
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.835 0.688
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.835 0.688
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.824 0.562
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.824 0.562
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.824 0.562
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.824 0.562
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.824 0.562
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.824 0.562
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.824 0.562
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.824 0.562
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.824 0.562
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000009333 bZIP 290 353

Links

Other bZIP family TFs
Other Danio rerio TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10696 Aegilops tauschii F775_10696 N
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I
HMGB13 Arabidopsis thaliana AT4G11080 D
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I
Carubv10000930m.g Capsella rubella Carubv10000930m.g I
MLOC_57360 Hordeum vulgare MLOC_57360 N
LPERR02G09420 Leersia perrieri LPERR02G09420 N
Lus10001909.g Linum usitatissimum Lus10001909.g I
mgf015439m Mimulus guttatus mgf015439m I
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I
OBART02G11160 Oryza barthii OBART02G11160 I
OB02G19930 Oryza brachyantha OB02G19930 N
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I
OLONG_021730 Oryza longistaminata OLONG_021730 N
OMERI02G11890 Oryza meridionalis OMERI02G11890 N
ONIVA02G12490 Oryza nivara ONIVA02G12490 I
OPUNC02G09900 Oryza punctata OPUNC02G09900 I
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I
OS02G0258200 Oryza sativa OS02G0258200 N
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I
Pavir.J07596 Panicum virgatum Pavir.J07596 I
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I
Pm024077 Prunus mume Pm024077 I
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I
Si017040m.g Setaria italica Si017040m.g I
Sb04g009610 Sorghum bicolor Sb04g009610 I
TCM_016416 Theobroma cacao TCM_016416 I
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I
GRMZM2G060253 Zea mays GRMZM2G060253 I