ACEP20577 (Atta cephalotes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACEP20577 T079463_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.810 0.956
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.810 0.956
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.810 0.956
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.810 0.956
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.806 0.930
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.806 0.930
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.806 0.930
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.787 0.877
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.787 0.877
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.787 0.877
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.787 0.877
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP20577-PA C2H2 ZF 299 321
ACEP20577-PA C2H2 ZF 327 348
ACEP20577-PA C2H2 ZF 371 393
ACEP20577-PA C2H2 ZF 399 421
ACEP20577-PA C2H2 ZF 427 449

Links

Other C2H2 ZF family TFs
Other Atta cephalotes TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK24260.1 Cannabis sativa PK24260.1 N
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N
Ca_22597 Cicer arietinum Ca_22597 N
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N
GLYMA12G11330 Glycine max GLYMA12G11330 I
GLYMA02G12254 Glycine max GLYMA02G12254 I
GLYMA06G45520 Glycine max GLYMA06G45520 N
GLYMA06G45531 Glycine max GLYMA06G45531 N
GLYMA06G45540 Glycine max GLYMA06G45540 N
GLYMA06G45547 Glycine max GLYMA06G45547 N
GLYMA01G06192 Glycine max GLYMA01G06192 I
GLYMA06G45554 Glycine max GLYMA06G45554 I
GLYMA12G11340 Glycine max GLYMA12G11340 N
GLYMA12G11390 Glycine max GLYMA12G11390 N
GLYMA12G11490 Glycine max GLYMA12G11490 N
GLYMA12G32541 Glycine max GLYMA12G32541 N
GLYMA13G37903 Glycine max GLYMA13G37903 I
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I
Lus10031607.g Linum usitatissimum Lus10031607.g N
Lus10018547.g Linum usitatissimum Lus10018547.g N
Lus10018545.g Linum usitatissimum Lus10018545.g N
Lus10033738.g Linum usitatissimum Lus10033738.g N
Lus10039734.g Linum usitatissimum Lus10039734.g I
Lus10039735.g Linum usitatissimum Lus10039735.g I
Lus10039772.g Linum usitatissimum Lus10039772.g N
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N
MDP0000407613 Malus domestica MDP0000407613 N
MDP0000155426 Malus domestica MDP0000155426 I
cassava14699.m1 Manihot esculenta cassava14699.m1 I
cassava26894.m1 Manihot esculenta cassava26894.m1 N
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N
MTR_1g043050 Medicago truncatula MTR_1g043050 I
MTR_2g089420 Medicago truncatula MTR_2g089420 N
MTR_2g089450 Medicago truncatula MTR_2g089450 N
mgf011672m Mimulus guttatus mgf011672m I
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I
Pm015302 Prunus mume Pm015302 N
Pm028882 Prunus mume Pm028882 I
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I
TCM_007865 Theobroma cacao TCM_007865 I
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I