TRE_0001278101 (Trichobilharzia regenti)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TRE_0001278101 T158011_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001278101-mRNA-1 C2H2 ZF 424 446
TRE_0001278101-mRNA-1 C2H2 ZF 450 472
TRE_0001278101-mRNA-1 C2H2 ZF 478 500
TRE_0001278101-mRNA-1 C2H2 ZF 506 527

Links

Other C2H2 ZF family TFs
Other Trichobilharzia regenti TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I
Aquca_035_00040 Aquilegia coerulea Aquca_035_00040 I
Aquca_045_00054 Aquilegia coerulea Aquca_045_00054 I
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N
scaffold_602413.1 Arabidopsis lyrata scaffold_602413.1 N
HMGB3 Arabidopsis thaliana AT1G20696 I
HMGB7 Arabidopsis thaliana AT5G23420 N
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I
BRADI4G37247 Brachypodium distachyon BRADI4G37247 I
Bo2g160920 Brassica oleracea Bo2g160920 I
Bo5g030580 Brassica oleracea Bo5g030580 I
Bo7g061420 Brassica oleracea Bo7g061420 I
Bo8g070350 Brassica oleracea Bo8g070350 I
Bo9g014140 Brassica oleracea Bo9g014140 I
Bra025838 Brassica rapa Bra025838 I
Bra026498 Brassica rapa Bra026498 I
Bra029371 Brassica rapa Bra029371 I
PK03866.1 Cannabis sativa PK03866.1 I
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I
Carubv10001858m.g Capsella rubella Carubv10001858m.g I
Carubv10012681m.g Capsella rubella Carubv10012681m.g I
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N
Ca_05351 Cicer arietinum Ca_05351 I
Ca_09896 Cicer arietinum Ca_09896 I
Cla009093 Citrullus lanatus Cla009093 I
Cla009222 Citrullus lanatus Cla009222 I
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I
Cucsa.300030 Cucumis sativus Cucsa.300030 I
Cucsa.323100 Cucumis sativus Cucsa.323100 I
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N
Thhalv10009371m.g Eutrema salsugineum Thhalv10009371m.g I
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I
GLYMA10G43440 Glycine max GLYMA10G43440 I
GLYMA20G23370 Glycine max GLYMA20G23370 I
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I
LPERR08G00140 Leersia perrieri LPERR08G00140 N
Lus10012252.g Linum usitatissimum Lus10012252.g I
Lus10016025.g Linum usitatissimum Lus10016025.g I
Lus10028298.g Linum usitatissimum Lus10028298.g I
Lus10040192.g Linum usitatissimum Lus10040192.g I
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I
LjT35D08.150.nd Lotus japonicus LjT35D08.150.nd I
MDP0000205665 Malus domestica MDP0000205665 I
MDP0000275042 Malus domestica MDP0000275042 I
MDP0000362980 Malus domestica MDP0000362980 I
MDP0000607529 Malus domestica MDP0000607529 I
MDP0000757111 Malus domestica MDP0000757111 I
cassava1392.valid.m1 Manihot esculenta cassava1392.valid.m1 I
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I
MTR_1g115220 Medicago truncatula MTR_1g115220 I
MTR_7g068280 Medicago truncatula MTR_7g068280 I
MTR_8g073345 Medicago truncatula MTR_8g073345 I
mgf000913m Mimulus guttatus mgf000913m I
mgf006113m Mimulus guttatus mgf006113m I
mgf008076m Mimulus guttatus mgf008076m I
mgf009124m Mimulus guttatus mgf009124m N
mgf009330m Mimulus guttatus mgf009330m I
mgf014518m Mimulus guttatus mgf014518m I
mgf016608m Mimulus guttatus mgf016608m I
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N
OBART08G00070 Oryza barthii OBART08G00070 I
OB08G10120 Oryza brachyantha OB08G10120 N
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I
BGIOSGA027814 Oryza indica BGIOSGA027814 I
BGIOSGA027819 Oryza indica BGIOSGA027819 I
OLONG_014445 Oryza longistaminata OLONG_014445 I
ONIVA08G00070 Oryza nivara ONIVA08G00070 I
OPUNC08G00150 Oryza punctata OPUNC08G00150 I
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I
OS08G0101100 Oryza sativa OS08G0101100 I
Pavir.J10680 Panicum virgatum Pavir.J10680 N
PDK_20s1306741g001 Phoenix dactylifera PDK_20s1306741g001 I
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I
fgenesh1_pg.scaffold_277000017 Physcomitrella patens fgenesh1_pg.scaffold_277000017 I
POPTR_0002s01000 Populus trichocarpa POPTR_0002s01000 I
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I
HMGB6 Populus trichocarpa POPTR_0007s15320 I
Pm006054 Prunus mume Pm006054 I
Pm018913 Prunus mume Pm018913 I
Pm026798 Prunus mume Pm026798 I
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I
PRUPE_ppa012424mg Prunus persica PRUPE_ppa012424mg I
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I
29669.m000844 Ricinus communis 29669.m000844 I
30131.m007272 Ricinus communis 30131.m007272 I
30170.m014386 Ricinus communis 30170.m014386 I
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I
SapurV1A.0266s0310 Salix purpurea SapurV1A.0266s0310 I
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I
Si014434m.g Setaria italica Si014434m.g N
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I
Sb07g000230 Sorghum bicolor Sb07g000230 N
TCM_000068 Theobroma cacao TCM_000068 I
TCM_007659 Theobroma cacao TCM_007659 I
TCM_034406 Theobroma cacao TCM_034406 I
TCM_042534 Theobroma cacao TCM_042534 I
Traes_5BL_9CC98DD38 Triticum aestivum Traes_5BL_9CC98DD38 I
Traes_5DL_DD9491112 Triticum aestivum Traes_5DL_DD9491112 I
VIT_04s0044g00110 Vitis vinifera VIT_04s0044g00110 I
HMGB6 Vitis vinifera VIT_10s0071g00870 I
VIT_18s0122g01190 Vitis vinifera VIT_18s0122g01190 I
GRMZM2G125648 Zea mays GRMZM2G125648 N
GRMZM2G162284 Zea mays GRMZM2G162284 I