mgf009124m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf009124m T334288_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mgf009124m Sox 112 180

Links

Other Sox family TFs
Other Mimulus guttatus TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm006054 Prunus mume Pm006054 I 0.561
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.561
Bra026498 Brassica rapa Bra026498 I 0.555
Bo9g014140 Brassica oleracea Bo9g014140 I 0.555
Bo2g160920 Brassica oleracea Bo2g160920 I 0.551
Bra029371 Brassica rapa Bra029371 I 0.551
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.550
Cla009222 Citrullus lanatus Cla009222 I 0.546
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.546
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.545
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.545
MDP0000205665 Malus domestica MDP0000205665 I 0.542
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.541
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.532
30131.m007272 Ricinus communis 30131.m007272 I 0.527
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N 0.525
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.517
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.512
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.512
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.512
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.512
TCM_007659 Theobroma cacao TCM_007659 I 0.510
scaffold_602413.1 Arabidopsis lyrata scaffold_602413.1 N 0.504
HMGB7 Arabidopsis thaliana AT5G23420 N 0.504
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.500
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.491
Lus10041009.g Linum usitatissimum Lus10041009.g N 0.475
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.471
OBART08G00070 Oryza barthii OBART08G00070 I 0.471
OS08G0101100 Oryza sativa OS08G0101100 I 0.471
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.471
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.471
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.471
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.471
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.471
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.471
fgenesh2_kg.6__1935__AT5G23420.1 Arabidopsis lyrata fgenesh2_kg.6__1935__AT5G23420.1 N 0.467
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.456
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.453
OB08G10120 Oryza brachyantha OB08G10120 N 0.452
cassava1392.valid.m1 Manihot esculenta cassava1392.valid.m1 I 0.449
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I 0.448
Ca_05351 Cicer arietinum Ca_05351 I 0.445
PK03866.1 Cannabis sativa PK03866.1 I 0.445
Si014434m.g Setaria italica Si014434m.g N 0.444
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.440
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.440
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.434
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.431