Pavir.Ga01057 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ga01057 T202996_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01057.1.p GRAS 358 717
Pavir.Ga01057.2.p GRAS 358 717

Links

Other GRAS family TFs
Other Panicum virgatum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
MYB3R-3 Arabidopsis thaliana AT3G09370 I
MYB3R5 Arabidopsis thaliana AT5G02320 D
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I
Bo1g144510 Brassica oleracea Bo1g144510 I
Bo5g139340 Brassica oleracea Bo5g139340 I
Bo9g184660 Brassica oleracea Bo9g184660 I
Bra009597 Brassica rapa Bra009597 I
Bra029762 Brassica rapa Bra029762 I
Bra034067 Brassica rapa Bra034067 I
PK11664.1 Cannabis sativa PK11664.1 I
PK12011.1 Cannabis sativa PK12011.1 D
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I
Carubv10000643m.g Capsella rubella Carubv10000643m.g I
Carubv10013377m.g Capsella rubella Carubv10013377m.g I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
Ca_14925 Cicer arietinum Ca_14925 I
Ca_21127 Cicer arietinum Ca_21127 I
Cla018173 Citrullus lanatus Cla018173 I
Cla023357 Citrullus lanatus Cla023357 I
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
Cucsa.175460 Cucumis sativus Cucsa.175460 I
Cucsa.311420 Cucumis sativus Cucsa.311420 I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I
GLYMA03G19470 Glycine max GLYMA03G19470 I
GLYMA07G15820 Glycine max GLYMA07G15820 I
GLYMA17G26240 Glycine max GLYMA17G26240 I
GLYMA18G39740 Glycine max GLYMA18G39740 I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
Lus10022136.g Linum usitatissimum Lus10022136.g I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I
MDP0000179225 Malus domestica MDP0000179225 I
MDP0000219581 Malus domestica MDP0000219581 I
MDP0000295807 Malus domestica MDP0000295807 I
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I
MTR_1g026870 Medicago truncatula MTR_1g026870 I
MTR_3g110028 Medicago truncatula MTR_3g110028 I
MTR_7g061330 Medicago truncatula MTR_7g061330 I
MTR_7g461410 Medicago truncatula MTR_7g461410 I
mgf019610m Mimulus guttatus mgf019610m I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I
OBART05G19200 Oryza barthii OBART05G19200 I
OB01G18340 Oryza brachyantha OB01G18340 I
OB01G45570 Oryza brachyantha OB01G45570 I
OB12G16480 Oryza brachyantha OB12G16480 I
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I
BGIOSGA017917 Oryza indica BGIOSGA017917 I
OLONG_011208 Oryza longistaminata OLONG_011208 I
ONIVA05G20060 Oryza nivara ONIVA05G20060 I
OPUNC05G16800 Oryza punctata OPUNC05G16800 I
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I
MYB3R-2 Oryza sativa OS01G0841500 I
OS05G0459000 Oryza sativa OS05G0459000 I
OS12G0238000 Oryza sativa OS12G0238000 I
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
Pm002704 Prunus mume Pm002704 I
Pm005124 Prunus mume Pm005124 I
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
29846.m000184 Ricinus communis 29846.m000184 I
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
Si000842m.g Setaria italica Si000842m.g I
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I
Sb03g039470 Sorghum bicolor Sb03g039470 I
TCM_021936 Theobroma cacao TCM_021936 I
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
TRIUR3_29290 Triticum urartu TRIUR3_29290 I
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I
GRMZM2G081919 Zea mays GRMZM2G081919 I