VIT_01s0011g03730 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_01s0011g03730 T281880_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.867 0.903
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.867 0.903
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.812 0.849
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.812 0.849
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.754 0.817
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.730 0.806
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.714 0.796
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.713 0.731
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.713 0.731
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.713 0.731
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.707 0.731
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.689 0.656
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.662 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0011g03730.t01 Myb 19 66
VIT_01s0011g03730.t01 Myb 72 117

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

671 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06533 Aegilops tauschii F775_06533 N
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I
Aquca_035_00040 Aquilegia coerulea Aquca_035_00040 I
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I
HMGB2 Arabidopsis thaliana AT1G20693 I
HMGB3 Arabidopsis thaliana AT1G20696 I
HMGB1 Arabidopsis thaliana AT3G51880 I
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I
BRADI3G12920 Brachypodium distachyon BRADI3G12920 I
Bo5g030580 Brassica oleracea Bo5g030580 I
Bo7g061420 Brassica oleracea Bo7g061420 I
Bo8g070350 Brassica oleracea Bo8g070350 I
Bo8g081200 Brassica oleracea Bo8g081200 I
Bra002073 Brassica rapa Bra002073 I
Bra025838 Brassica rapa Bra025838 I
PK03866.1 Cannabis sativa PK03866.1 I
PK14705.1 Cannabis sativa PK14705.1 I
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I
Carubv10010586m.g Capsella rubella Carubv10010586m.g I
Carubv10012681m.g Capsella rubella Carubv10012681m.g I
Carubv10018109m.g Capsella rubella Carubv10018109m.g I
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N
evm.TU.supercontig_26.174 Carica papaya evm.TU.supercontig_26.174 I
Ca_05351 Cicer arietinum Ca_05351 I
Ca_09896 Cicer arietinum Ca_09896 I
Cla009093 Citrullus lanatus Cla009093 I
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N
Ciclev10026715m.g Citrus clementina Ciclev10026715m.g I
Ciclev10032930m.g Citrus clementina Ciclev10032930m.g I
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I
orange1.1g031973m.g Citrus sinensis orange1.1g031973m.g I
Cucsa.323100 Cucumis sativus Cucsa.323100 I
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I
Thhalv10009371m.g Eutrema salsugineum Thhalv10009371m.g I
Thhalv10009970m.g Eutrema salsugineum Thhalv10009970m.g I
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I
GLYMA01G28820 Glycine max GLYMA01G28820 I
GLYMA03G08270 Glycine max GLYMA03G08270 I
GLYMA09G33070 Glycine max GLYMA09G33070 I
GLYMA10G43440 Glycine max GLYMA10G43440 I
GLYMA16G22060 Glycine max GLYMA16G22060 I
GLYMA20G23370 Glycine max GLYMA20G23370 I
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I
Gorai.009G186800 Gossypium raimondii Gorai.009G186800 I
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I
MLOC_77667 Hordeum vulgare MLOC_77667 I
LPERR08G00140 Leersia perrieri LPERR08G00140 N
Lus10012252.g Linum usitatissimum Lus10012252.g I
Lus10016025.g Linum usitatissimum Lus10016025.g I
Lus10028298.g Linum usitatissimum Lus10028298.g I
Lus10040192.g Linum usitatissimum Lus10040192.g I
Lus10041009.g Linum usitatissimum Lus10041009.g N
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I
LjT35D08.150.nd Lotus japonicus LjT35D08.150.nd I
MDP0000205665 Malus domestica MDP0000205665 I
MDP0000275042 Malus domestica MDP0000275042 I
MDP0000607529 Malus domestica MDP0000607529 I
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I
MTR_1g115220 Medicago truncatula MTR_1g115220 I
MTR_3g115580 Medicago truncatula MTR_3g115580 I
MTR_7g068280 Medicago truncatula MTR_7g068280 I
MTR_7g082820 Medicago truncatula MTR_7g082820 I
MTR_8g018100 Medicago truncatula MTR_8g018100 N
MTR_8g073345 Medicago truncatula MTR_8g073345 I
mgf006113m Mimulus guttatus mgf006113m I
mgf008076m Mimulus guttatus mgf008076m I
mgf009330m Mimulus guttatus mgf009330m I
mgf014518m Mimulus guttatus mgf014518m I
mgf016608m Mimulus guttatus mgf016608m I
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N
OBART04G21800 Oryza barthii OBART04G21800 N
OBART08G00070 Oryza barthii OBART08G00070 I
OB04G28810 Oryza brachyantha OB04G28810 N
OB08G10120 Oryza brachyantha OB08G10120 N
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I
BGIOSGA016928 Oryza indica BGIOSGA016928 N
BGIOSGA023639 Oryza indica BGIOSGA023639 I
BGIOSGA027814 Oryza indica BGIOSGA027814 I
BGIOSGA027819 Oryza indica BGIOSGA027819 I
OLONG_014445 Oryza longistaminata OLONG_014445 I
OMERI04G18350 Oryza meridionalis OMERI04G18350 N
ONIVA04G20340 Oryza nivara ONIVA04G20340 N
ONIVA08G00070 Oryza nivara ONIVA08G00070 I
OPUNC04G19550 Oryza punctata OPUNC04G19550 N
OPUNC08G00150 Oryza punctata OPUNC08G00150 I
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I
OS04G0564600 Oryza sativa OS04G0564600 N
OS08G0101100 Oryza sativa OS08G0101100 I
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I
Pavir.Fb00026 Panicum virgatum Pavir.Fb00026 N
Pavir.J10680 Panicum virgatum Pavir.J10680 N
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I
HMG-1 Pisum sativum Q41026_PEA D
POPTR_0002s01000 Populus trichocarpa POPTR_0002s01000 I
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I
HMGB6 Populus trichocarpa POPTR_0007s15320 I
Pm006054 Prunus mume Pm006054 I
Pm026798 Prunus mume Pm026798 I
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I
29669.m000844 Ricinus communis 29669.m000844 I
30170.m014386 Ricinus communis 30170.m014386 I
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I
SapurV1A.0266s0310 Salix purpurea SapurV1A.0266s0310 I
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I
SELMODRAFT_18312 Selaginella moellendorffii SELMODRAFT_18312 I
SELMODRAFT_18313 Selaginella moellendorffii SELMODRAFT_18313 I
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I
Si007288m.g Setaria italica Si007288m.g I
Si014434m.g Setaria italica Si014434m.g N
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I
Sb07g000230 Sorghum bicolor Sb07g000230 N
TCM_000068 Theobroma cacao TCM_000068 I
TCM_034406 Theobroma cacao TCM_034406 I
TCM_042534 Theobroma cacao TCM_042534 I
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N
Traes_7AL_959534EDB Triticum aestivum Traes_7AL_959534EDB I
Traes_7BL_871FCAF2F Triticum aestivum Traes_7BL_871FCAF2F I
Traes_7DL_824BFE90C Triticum aestivum Traes_7DL_824BFE90C I
GRMZM2G125648 Zea mays GRMZM2G125648 N
GRMZM2G162284 Zea mays GRMZM2G162284 I
GRMZM5G834758 Zea mays GRMZM5G834758 I