Thhalv10004638m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10004638m.g T289959_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.772 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004638m Myb 14 61
Thhalv10004638m Myb 67 112

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.693
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.772
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.715
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.693
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.900
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.691
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.697
MYB28 Arabidopsis thaliana AT5G61420 I 0.697
MYB34 Arabidopsis thaliana AT5G60890 I 0.900
MYB76 Arabidopsis thaliana AT5G07700 I 0.691
MYB29 Arabidopsis thaliana AT5G07690 I 0.709
MYB122 Arabidopsis thaliana AT1G74080 I 0.710
MYB51 Arabidopsis thaliana AT1G18570 D 0.772
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.697
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.866
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.772
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.709
Bo7g117140 Brassica oleracea Bo7g117140 I 0.667
Bo7g098590 Brassica oleracea Bo7g098590 I 0.687
Bo7g098110 Brassica oleracea Bo7g098110 I 0.897
Bo6g118350 Brassica oleracea Bo6g118350 I 0.720
Bo5g025570 Brassica oleracea Bo5g025570 I 0.775
Bo3g004500 Brassica oleracea Bo3g004500 I 0.697
Bo2g161590 Brassica oleracea Bo2g161590 I 0.697
Bo2g161180 Brassica oleracea Bo2g161180 I 0.876
Bo2g161170 Brassica oleracea Bo2g161170 I 0.836
Bo2g080900 Brassica oleracea Bo2g080900 I 0.736
Bo1g157620 Brassica oleracea Bo1g157620 I 0.666
Bo9g175680 Brassica oleracea Bo9g175680 I 0.698
Bo9g014610 Brassica oleracea Bo9g014610 I 0.697
Bo9g014380 Brassica oleracea Bo9g014380 I 0.842
Bo8g104300 Brassica oleracea Bo8g104300 I 0.768
Bo8g067910 Brassica oleracea Bo8g067910 I 0.766
Bra035954 Brassica rapa Bra035954 I 0.833
Bra029349 Brassica rapa Bra029349 I 0.852
Bra035929 Brassica rapa Bra035929 I 0.697
Bra031035 Brassica rapa Bra031035 I 0.768
Bra029350 Brassica rapa Bra029350 I 0.854
Bra029311 Brassica rapa Bra029311 I 0.673
Bra025666 Brassica rapa Bra025666 I 0.775
Bra021483 Brassica rapa Bra021483 I 0.666
Bra017685 Brassica rapa Bra017685 I 0.667
Bra016553 Brassica rapa Bra016553 I 0.766
Bra015939 Brassica rapa Bra015939 I 0.720
Bra013000 Brassica rapa Bra013000 I 0.900
Bra012961 Brassica rapa Bra012961 I 0.687
Bra008131 Brassica rapa Bra008131 I 0.725
Bra005949 Brassica rapa Bra005949 I 0.723
PK26207.1 Cannabis sativa PK26207.1 I 0.662
PK14811.1 Cannabis sativa PK14811.1 I 0.749
PK01174.1 Cannabis sativa PK01174.1 I 0.711
PK27708.1 Cannabis sativa PK27708.1 I 0.721
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.697
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.709
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.772
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.697
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.896
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.664
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.772
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.709
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.705
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.669
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.661
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.663
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.697
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.709
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.740
Thhalv10021048m.g Eutrema salsugineum Thhalv10021048m.g I 0.666
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.775
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.700
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.683
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.713
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.663
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.718
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.675
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.675
MDP0000887107 Malus domestica MDP0000887107 I 0.674
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.704
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.712
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.668
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.704
MTR_6g012690 Medicago truncatula MTR_6g012690 I 0.662
GSMUA_Achr11G07180_001 Musa acuminata GSMUA_Achr11G07180_001 I 0.664
Pm027048 Prunus mume Pm027048 I 0.685
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.685
Solyc01g010910.1 Solanum lycopersicum Solyc01g010910.1 I 0.668
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.662
PGSC0003DMG400024299 Solanum tuberosum PGSC0003DMG400024299 I 0.668
TCM_000535 Theobroma cacao TCM_000535 I 0.665
TCM_014091 Theobroma cacao TCM_014091 I 0.693
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.675