Thhalv10005299m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10005299m.g T289967_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.903 0.946
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.903 0.946
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10005299m Myb 14 62
Thhalv10005299m Myb 68 113

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N
Bo7g049880 Brassica oleracea Bo7g049880 I
PK01533.1 Cannabis sativa PK01533.1 N
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N
Ca_11038 Cicer arietinum Ca_11038 N
Cla016088 Citrullus lanatus Cla016088 N
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N
Cucsa.381750 Cucumis sativus Cucsa.381750 N
ETH_00029175 Eimeria tenella ETH_00029175 N
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N
GLYMA11G11290 Glycine max GLYMA11G11290 N
GLYMA12G03470 Glycine max GLYMA12G03470 N
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I
LPERR08G02000 Leersia perrieri LPERR08G02000 N
LPERR02G01370 Leersia perrieri LPERR02G01370 N
Lus10027839.g Linum usitatissimum Lus10027839.g N
Lus10025058.g Linum usitatissimum Lus10025058.g N
Lus10005066.g Linum usitatissimum Lus10005066.g N
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N
MDP0000225222 Malus domestica MDP0000225222 N
MDP0000155077 Malus domestica MDP0000155077 N
MDP0000202739 Malus domestica MDP0000202739 N
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N
mgf015980m Mimulus guttatus mgf015980m I
mgf014458m Mimulus guttatus mgf014458m N
mgf001526m Mimulus guttatus mgf001526m N
OBART02G01600 Oryza barthii OBART02G01600 N
OB02G23180 Oryza brachyantha OB02G23180 I
ORGLA08G0012100 Oryza glaberrima ORGLA08G0012100 N
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N
OGLUM08G01920 Oryza glumaepatula OGLUM08G01920 N
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N
BGIOSGA007226 Oryza indica BGIOSGA007226 N
BGIOSGA027713 Oryza indica BGIOSGA027713 N
OMERI02G00930 Oryza meridionalis OMERI02G00930 N
OMERI08G01940 Oryza meridionalis OMERI08G01940 N
ONIVA02G01490 Oryza nivara ONIVA02G01490 N
ONIVA08G01720 Oryza nivara ONIVA08G01720 N
OPUNC02G01060 Oryza punctata OPUNC02G01060 N
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N
ORUFI08G02050 Oryza rufipogon ORUFI08G02050 N
OS08G0129200 Oryza sativa OS08G0129200 N
OS02G0121100 Oryza sativa OS02G0121100 N
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N
Pavir.J33226 Panicum virgatum Pavir.J33226 N
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N
Pm020837 Prunus mume Pm020837 I
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N
Sb04g001720 Sorghum bicolor Sb04g001720 N
Sb06g029650 Sorghum bicolor Sb06g029650 N
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N
TRIUR3_31144 Triticum urartu TRIUR3_31144 N
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N
estExt_Genewise1Plus.C_10818 Volvox carteri estExt_Genewise1Plus.C_10818 N
GRMZM5G895313 Zea mays GRMZM5G895313 N
GRMZM2G389768 Zea mays GRMZM2G389768 N