SMAC_08866 (Sordaria macrospora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SMAC_08866 T383995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03417
M01422_2.00 		Neurospora crassa
NNTCGGNNNH
DNNNCCGANN		 PBM
Lambert et al.(2019)
pTH8926 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC14302 Zinc cluster 65 102

Links

Other Zinc cluster family TFs
Other Sordaria macrospora TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
fgenesh2_kg.6__3081__AT4G11080.1 Arabidopsis lyrata fgenesh2_kg.6__3081__AT4G11080.1 I 0.000
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
HMGB6 Arabidopsis thaliana AT4G23800 I 0.000
Bostr.7867s0182 Boechera stricta Bostr.7867s0182 I 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Bo1g037180 Brassica oleracea Bo1g037180 I 0.000
Bra013731 Brassica rapa Bra013731 I 0.000
Bra035256 Brassica rapa Bra035256 I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I 0.000
Carubv10007590m.g Capsella rubella Carubv10007590m.g I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I 0.000
Cucsa.107270 Cucumis sativus Cucsa.107270 I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I 0.000
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I 0.000
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
Lus10033951.g Linum usitatissimum Lus10033951.g N 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.000
MDP0000268093 Malus domestica MDP0000268093 I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.000