Bo6g022410 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g022410 T000855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.758 0.830
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.758 0.830
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.758 0.830
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.753 0.894
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.753 0.894
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.753 0.894
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.686 0.766
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g022410.1 AP2 26 77

Links

Other AP2 family TFs
Other Brassica oleracea TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf007166m Mimulus guttatus mgf007166m I 0.784
mgf016282m Mimulus guttatus mgf016282m I 0.783
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.783
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.783
Pm014953 Prunus mume Pm014953 I 0.783
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.783
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.783
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.783
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.783
MDP0000839828 Malus domestica MDP0000839828 I 0.783
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.781
PK25211.1 Cannabis sativa PK25211.1 I 0.781
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.780
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.780
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.780
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.777
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.775
MDP0000542633 Malus domestica MDP0000542633 I 0.773
Pm011907 Prunus mume Pm011907 I 0.773
MDP0000629527 Malus domestica MDP0000629527 I 0.773
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.772
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.772
29640.m000403 Ricinus communis 29640.m000403 I 0.772
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.770
Bra018864 Brassica rapa Bra018864 I 0.770
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.768
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.767
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.767
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.766
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.766
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.761
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.760
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.760
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.759
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.759
ERF7 Arabidopsis thaliana AT3G20310 D 0.758
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.757
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.755
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.754
ERF3 Arabidopsis thaliana AT1G50640 D 0.753
MDP0000243113 Malus domestica MDP0000243113 I 0.752
MDP0000744693 Malus domestica MDP0000744693 I 0.752
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.752
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.752
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.749
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.747
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.747
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.745
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.745
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.744
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.742
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.742
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.742
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.742
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.742
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.741
Cla005423 Citrullus lanatus Cla005423 I 0.741
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.740
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.740
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.739
Cla003319 Citrullus lanatus Cla003319 I 0.739
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.737
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.736
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.736
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.735
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.733
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.732
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.732
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.732
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.732
TCM_030804 Theobroma cacao TCM_030804 I 0.730
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.728
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.727
Lus10031526.g Linum usitatissimum Lus10031526.g I 0.722
Ca_17824 Cicer arietinum Ca_17824 I 0.722
Cla013723 Citrullus lanatus Cla013723 I 0.718
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.716
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.714
Ca_12205 Cicer arietinum Ca_12205 I 0.714
Bra038261 Brassica rapa Bra038261 I 0.714
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.714
Bo1g108970 Brassica oleracea Bo1g108970 I 0.714
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I 0.711
Bo5g109800 Brassica oleracea Bo5g109800 I 0.711
Bra035792 Brassica rapa Bra035792 I 0.711
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.711
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.710
Bo3g074840 Brassica oleracea Bo3g074840 I 0.710
Bra001784 Brassica rapa Bra001784 I 0.710
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.710
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.708
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.705
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.705
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.703
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.702
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.702
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.702
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.701
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.701
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.701
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.700
PK02998.1 Cannabis sativa PK02998.1 I 0.700
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.700
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.700
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.699
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.699
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.698
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.696
Ca_20544 Cicer arietinum Ca_20544 I 0.696
Si003053m.g Setaria italica Si003053m.g I 0.695
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.695
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.695
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.695
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.693
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.693
Pm020210 Prunus mume Pm020210 I 0.693
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.693
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.692
Lus10035076.g Linum usitatissimum Lus10035076.g I 0.692
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.692
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.692
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.692
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.691
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.691
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.691
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.690
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.690
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.690
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.690
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.689
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.687
Bra023748 Brassica rapa Bra023748 I 0.686
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.686
PK17878.1 Cannabis sativa PK17878.1 D 0.686
Bo1g102220 Brassica oleracea Bo1g102220 I 0.686
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.686
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.686
30190.m011323 Ricinus communis 30190.m011323 I 0.686
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.686
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.686
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.686
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.686
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.686
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.686
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.686
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.686
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.686
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.686
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.686
Pm010083 Prunus mume Pm010083 I 0.686
Cla020002 Citrullus lanatus Cla020002 I 0.686
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.686
mgf023367m Mimulus guttatus mgf023367m I 0.686
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.686
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.686
Ca_00326 Cicer arietinum Ca_00326 I 0.686
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.686
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.686
TCM_029823 Theobroma cacao TCM_029823 I 0.686
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.686
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.685
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.685
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.684
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.684
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.684
Lus10017907.g Linum usitatissimum Lus10017907.g I 0.683
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.683
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.683
Bra014925 Brassica rapa Bra014925 I 0.682
Bo7g040810 Brassica oleracea Bo7g040810 I 0.682
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.682
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.682
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.682
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.681
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.681
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.681
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.681
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.681
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.680
MDP0000457509 Malus domestica MDP0000457509 I 0.678
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.678
Cla003678 Citrullus lanatus Cla003678 I 0.677
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.677