CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G43500
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA02G43500
T001749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR
YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.730
0.872
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.730
0.872
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.730
0.872
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.717
0.787
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.717
0.787
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.717
0.787
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR
YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.688
0.766
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC
GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.681
0.745
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.681
0.745
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.681
0.745
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G43500.1
AP2
25
76
TRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAYDKAARSFRGP
Links
Other
AP2
family TFs
Other
Glycine max
TFs
239 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA14G05470
Glycine max
GLYMA14G05470
I
0.826
chr2.LjT24P12.30.nd
Lotus japonicus
chr2.LjT24P12.30.nd
I
0.801
evm.TU.supercontig_132.31
Carica papaya
evm.TU.supercontig_132.31
I
0.799
Lus10029987.g
Linum usitatissimum
Lus10029987.g
I
0.781
Lus10035329.g
Linum usitatissimum
Lus10035329.g
I
0.781
VIT_12s0059g01460
Vitis vinifera
VIT_12s0059g01460
I
0.780
PRUPE_ppa010804mg
Prunus persica
PRUPE_ppa010804mg
I
0.780
MDP0000839828
Malus domestica
MDP0000839828
I
0.780
mgf016282m
Mimulus guttatus
mgf016282m
I
0.780
Pm014953
Prunus mume
Pm014953
I
0.780
gene01152-v1.0-hybrid
Fragaria vesca
gene01152-v1.0-hybrid
I
0.780
evm.TU.supercontig_12.251
Carica papaya
evm.TU.supercontig_12.251
I
0.779
mgf007166m
Mimulus guttatus
mgf007166m
I
0.779
orange1.1g027990m.g
Citrus sinensis
orange1.1g027990m.g
I
0.779
Ciclev10016668m.g
Citrus clementina
Ciclev10016668m.g
I
0.779
PGSC0003DMG400022305
Solanum tuberosum
PGSC0003DMG400022305
I
0.772
orange1.1g045783m.g
Citrus sinensis
orange1.1g045783m.g
I
0.772
Solyc07g064890.1
Solanum lycopersicum
Solyc07g064890.1
I
0.772
PK25211.1
Cannabis sativa
PK25211.1
I
0.772
Ciclev10009361m.g
Citrus clementina
Ciclev10009361m.g
I
0.772
29640.m000403
Ricinus communis
29640.m000403
I
0.772
SapurV1A.0126s0330
Salix purpurea
SapurV1A.0126s0330
I
0.771
SapurV1A.0126s0320
Salix purpurea
SapurV1A.0126s0320
I
0.771
Aquca_027_00311
Aquilegia coerulea
Aquca_027_00311
I
0.770
PGSC0003DMG400014417
Solanum tuberosum
PGSC0003DMG400014417
I
0.768
Solyc10g006130.1
Solanum lycopersicum
Solyc10g006130.1
I
0.768
GSMUA_Achr4G06170_001
Musa acuminata
GSMUA_Achr4G06170_001
I
0.765
MDP0000542633
Malus domestica
MDP0000542633
I
0.765
Pm011907
Prunus mume
Pm011907
I
0.765
MDP0000629527
Malus domestica
MDP0000629527
I
0.765
POPTR_0001s36610
Populus trichocarpa
POPTR_0001s36610
I
0.764
Bo6g022410
Brassica oleracea
Bo6g022410
I
0.759
cassava43266.valid.m1
Manihot esculenta
cassava43266.valid.m1
I
0.758
Lus10031526.g
Linum usitatissimum
Lus10031526.g
I
0.751
Cucsa.190200
Cucumis sativus
Cucsa.190200
I
0.749
Cla003319
Citrullus lanatus
Cla003319
I
0.749
GSMUA_Achr4G11430_001
Musa acuminata
GSMUA_Achr4G11430_001
I
0.748
PRUPE_ppa010893mg
Prunus persica
PRUPE_ppa010893mg
I
0.748
Cla005423
Citrullus lanatus
Cla005423
I
0.748
GSMUA_Achr4G04060_001
Musa acuminata
GSMUA_Achr4G04060_001
I
0.748
GSMUA_Achr1G18230_001
Musa acuminata
GSMUA_Achr1G18230_001
I
0.746
Ca_17824
Cicer arietinum
Ca_17824
I
0.745
MDP0000243113
Malus domestica
MDP0000243113
I
0.743
MDP0000744693
Malus domestica
MDP0000744693
I
0.743
Eucgr.A01091
Eucalyptus grandis
Eucgr.A01091
I
0.739
cassava34729.m1
Manihot esculenta
cassava34729.m1
I
0.737
Cucsa.042770
Cucumis sativus
Cucsa.042770
I
0.737
Carubv10010284m.g
Capsella rubella
Carubv10010284m.g
I
0.732
Cagra.0952s0001
Capsella grandiflora
Cagra.0952s0001
I
0.732
Thhalv10011689m.g
Eutrema salsugineum
Thhalv10011689m.g
I
0.732
Thhalv10021393m.g
Eutrema salsugineum
Thhalv10021393m.g
I
0.731
ERF3
Arabidopsis thaliana
AT1G50640
D
0.730
GLYMA02G46340
Glycine max
GLYMA02G46340
I
0.729
Cla013723
Citrullus lanatus
Cla013723
I
0.728
OPUNC02G05940
Oryza punctata
OPUNC02G05940
I
0.727
LPERR02G05920
Leersia perrieri
LPERR02G05920
I
0.727
Gorai.002G092900
Gossypium raimondii
Gorai.002G092900
I
0.727
VIT_19s0090g01080
Vitis vinifera
VIT_19s0090g01080
I
0.727
TCM_030804
Theobroma cacao
TCM_030804
I
0.727
Gorai.007G312200
Gossypium raimondii
Gorai.007G312200
I
0.726
GRMZM2G146028
Zea mays
GRMZM2G146028
I
0.724
BRADI3G06562
Brachypodium distachyon
BRADI3G06562
I
0.724
Pavir.Aa03102
Panicum virgatum
Pavir.Aa03102
I
0.724
Sb04g006080
Sorghum bicolor
Sb04g006080
I
0.724
Pavir.Ab00660
Panicum virgatum
Pavir.Ab00660
I
0.724
GSMUA_AchrUn_randomG06910_001
Musa acuminata
GSMUA_AchrUn_randomG06910_001
I
0.724
GRMZM2G079653
Zea mays
GRMZM2G079653
I
0.723
Gorai.013G169500
Gossypium raimondii
Gorai.013G169500
I
0.722
Cucsa.139820
Cucumis sativus
Cucsa.139820
I
0.721
GLYMA06G44430
Glycine max
GLYMA06G44430
I
0.721
GLYMA14G02360
Glycine max
GLYMA14G02360
I
0.720
GLYMA12G13315
Glycine max
GLYMA12G13315
I
0.719
ORGLA02G0063000
Oryza glaberrima
ORGLA02G0063000
I
0.719
OGLUM02G06860
Oryza glumaepatula
OGLUM02G06860
I
0.719
OMERI02G07840
Oryza meridionalis
OMERI02G07840
I
0.719
ORUFI02G06880
Oryza rufipogon
ORUFI02G06880
I
0.719
Bra018864
Brassica rapa
Bra018864
I
0.718
ERF3
Arabidopsis lyrata
fgenesh2_kg.1__4150__AT1G50640.1
I
0.718
Bostr.26675s0113
Boechera stricta
Bostr.26675s0113
I
0.718
PGSC0003DMG400000681
Solanum tuberosum
PGSC0003DMG400000681
I
0.718
ERF7
Arabidopsis thaliana
AT3G20310
D
0.717
GSMUA_Achr4G06660_001
Musa acuminata
GSMUA_Achr4G06660_001
I
0.715
Bostr.26675s0388
Boechera stricta
Bostr.26675s0388
I
0.715
GSMUA_Achr5G09940_001
Musa acuminata
GSMUA_Achr5G09940_001
I
0.713
GSMUA_Achr3G29290_001
Musa acuminata
GSMUA_Achr3G29290_001
I
0.713
SELMODRAFT_129122
Selaginella moellendorffii
SELMODRAFT_129122
I
0.709
VIT_14s0081g00520
Vitis vinifera
VIT_14s0081g00520
I
0.709
Solyc07g049490.1
Solanum lycopersicum
Solyc07g049490.1
I
0.709
VIT_07s0141g00690
Vitis vinifera
VIT_07s0141g00690
I
0.709
PK02998.1
Cannabis sativa
PK02998.1
I
0.709
SELMODRAFT_17648
Selaginella moellendorffii
SELMODRAFT_17648
I
0.709
POPTR_0005s24110
Populus trichocarpa
POPTR_0005s24110
I
0.708
Ca_12205
Cicer arietinum
Ca_12205
I
0.706
POPTR_0002s04430
Populus trichocarpa
POPTR_0002s04430
I
0.704
Pm020210
Prunus mume
Pm020210
I
0.704
PRUPE_ppa022435mg
Prunus persica
PRUPE_ppa022435mg
I
0.704
AMTR_s00002p00264660
Amborella trichopoda
AMTR_s00002p00264660
I
0.703
GRMZM2G020150
Zea mays
GRMZM2G020150
I
0.702
gene03450-v1.0-hybrid
Fragaria vesca
gene03450-v1.0-hybrid
I
0.701
GRMZM2G174347
Zea mays
GRMZM2G174347
I
0.701
GLYMA03G31640
Glycine max
GLYMA03G31640
I
0.701
chr1.CM0375.170.nd
Lotus japonicus
chr1.CM0375.170.nd
I
0.700
Gorai.009G443400
Gossypium raimondii
Gorai.009G443400
I
0.698
Aquca_017_00628
Aquilegia coerulea
Aquca_017_00628
I
0.697
GSMUA_Achr6G00240_001
Musa acuminata
GSMUA_Achr6G00240_001
I
0.697
GSMUA_Achr3G13010_001
Musa acuminata
GSMUA_Achr3G13010_001
I
0.696
e_gw1.124.59.1
Physcomitrella patens
e_gw1.124.59.1
I
0.695
gw1.90.191.1
Physcomitrella patens
gw1.90.191.1
I
0.695
MTR_5g085100
Medicago truncatula
MTR_5g085100
I
0.695
estExt_gwp_gw1.C_1270048
Physcomitrella patens
estExt_gwp_gw1.C_1270048
I
0.695
SELMODRAFT_49950
Selaginella moellendorffii
SELMODRAFT_49950
I
0.695
Pavir.Ea03148
Panicum virgatum
Pavir.Ea03148
I
0.695
SELMODRAFT_73142
Selaginella moellendorffii
SELMODRAFT_73142
I
0.695
Pm011391
Prunus mume
Pm011391
I
0.694
Bra027270
Brassica rapa
Bra027270
I
0.694
SELMODRAFT_59974
Selaginella moellendorffii
SELMODRAFT_59974
I
0.694
Bo5g127380
Brassica oleracea
Bo5g127380
I
0.694
PRUPE_ppa010982mg
Prunus persica
PRUPE_ppa010982mg
I
0.694
MTR_2g078680
Medicago truncatula
MTR_2g078680
I
0.694
SELMODRAFT_19889
Selaginella moellendorffii
SELMODRAFT_19889
I
0.694
MDP0000324718
Malus domestica
MDP0000324718
I
0.693
gene21403-v1.0-hybrid
Fragaria vesca
gene21403-v1.0-hybrid
I
0.693
Sb03g037085
Sorghum bicolor
Sb03g037085
I
0.693
SELMODRAFT_430375
Selaginella moellendorffii
SELMODRAFT_430375
I
0.692
SELMODRAFT_443461
Selaginella moellendorffii
SELMODRAFT_443461
I
0.692
GSMUA_Achr9G11480_001
Musa acuminata
GSMUA_Achr9G11480_001
I
0.692
Aquca_036_00073
Aquilegia coerulea
Aquca_036_00073
I
0.691
Pavir.Eb03165
Panicum virgatum
Pavir.Eb03165
I
0.691
chr3.CM0080.270.nc
Lotus japonicus
chr3.CM0080.270.nc
I
0.690
MDP0000457509
Malus domestica
MDP0000457509
I
0.690
Lus10035076.g
Linum usitatissimum
Lus10035076.g
I
0.690
fgenesh1_pg.scaffold_6000034
Physcomitrella patens
fgenesh1_pg.scaffold_6000034
I
0.689
F775_20810
Aegilops tauschii
F775_20810
I
0.689
Ciclev10016982m.g
Citrus clementina
Ciclev10016982m.g
I
0.688
Gorai.011G029700
Gossypium raimondii
Gorai.011G029700
I
0.688
mgf023367m
Mimulus guttatus
mgf023367m
I
0.688
Cucsa.126860
Cucumis sativus
Cucsa.126860
I
0.688
Solyc02g077840.1
Solanum lycopersicum
Solyc02g077840.1
I
0.688
PGSC0003DMG400029713
Solanum tuberosum
PGSC0003DMG400029713
I
0.688
orange1.1g030994m.g
Citrus sinensis
orange1.1g030994m.g
I
0.688
POPTR_0004s04700
Populus trichocarpa
POPTR_0004s04700
I
0.688
cassava4486.m1
Manihot esculenta
cassava4486.m1
I
0.688
PRUPE_ppa012385mg
Prunus persica
PRUPE_ppa012385mg
I
0.688
SapurV1A.0012s0570
Salix purpurea
SapurV1A.0012s0570
I
0.688
SapurV1A.0032s0450
Salix purpurea
SapurV1A.0032s0450
I
0.688
GLYMA13G31010
Glycine max
GLYMA13G31010
I
0.688
chr6.CM0114.130.nc
Lotus japonicus
chr6.CM0114.130.nc
I
0.688
GLYMA15G08360
Glycine max
GLYMA15G08360
I
0.688
MTR_2g014300
Medicago truncatula
MTR_2g014300
I
0.688
evm.TU.supercontig_27.18
Carica papaya
evm.TU.supercontig_27.18
I
0.688
POPTR_0011s05570
Populus trichocarpa
POPTR_0011s05570
I
0.688
Pm010083
Prunus mume
Pm010083
I
0.688
Ca_00326
Cicer arietinum
Ca_00326
I
0.688
30190.m011323
Ricinus communis
30190.m011323
I
0.688
PK17878.1
Cannabis sativa
PK17878.1
D
0.688
cassava42971.valid.m1
Manihot esculenta
cassava42971.valid.m1
I
0.688
ERF12
Vitis vinifera
VIT_10s0003g00130
I
0.688
Cla020002
Citrullus lanatus
Cla020002
I
0.688
TCM_029823
Theobroma cacao
TCM_029823
I
0.688
gene29735-v1.0-hybrid
Fragaria vesca
gene29735-v1.0-hybrid
I
0.687
Bo3g074840
Brassica oleracea
Bo3g074840
I
0.686
Carubv10014475m.g
Capsella rubella
Carubv10014475m.g
I
0.686
Cagra.0316s0033
Capsella grandiflora
Cagra.0316s0033
I
0.686
BRADI2G21067
Brachypodium distachyon
BRADI2G21067
I
0.686
Bra001784
Brassica rapa
Bra001784
I
0.686
SELMODRAFT_439762
Selaginella moellendorffii
SELMODRAFT_439762
I
0.685
Eucgr.G00002
Eucalyptus grandis
Eucgr.G00002
I
0.685
Carubv10011371m.g
Capsella rubella
Carubv10011371m.g
I
0.685
SELMODRAFT_402810
Selaginella moellendorffii
SELMODRAFT_402810
I
0.685
MDP0000868587
Malus domestica
MDP0000868587
I
0.685
Cagra.0897s0005
Capsella grandiflora
Cagra.0897s0005
I
0.685
e_gw1.5.258.1
Physcomitrella patens
e_gw1.5.258.1
I
0.685
GSMUA_Achr8G15830_001
Musa acuminata
GSMUA_Achr8G15830_001
I
0.684
GSMUA_Achr6G01440_001
Musa acuminata
GSMUA_Achr6G01440_001
I
0.684
Thhalv10003431m.g
Eutrema salsugineum
Thhalv10003431m.g
I
0.684
Thhalv10021456m.g
Eutrema salsugineum
Thhalv10021456m.g
I
0.683
gene00975-v1.0-hybrid
Fragaria vesca
gene00975-v1.0-hybrid
I
0.683
Carubv10014552m.g
Capsella rubella
Carubv10014552m.g
I
0.683
VIT_19s0014g02240
Vitis vinifera
VIT_19s0014g02240
I
0.683
PK23186.1
Cannabis sativa
PK23186.1
I
0.683
SapurV1A.1325s0040
Salix purpurea
SapurV1A.1325s0040
I
0.682
SapurV1A.1244s0010
Salix purpurea
SapurV1A.1244s0010
I
0.682
Lus10017907.g
Linum usitatissimum
Lus10017907.g
I
0.682
Ca_22534
Cicer arietinum
Ca_22534
I
0.682
POPTR_0011s11620
Populus trichocarpa
POPTR_0011s11620
I
0.682
Cucsa.095860
Cucumis sativus
Cucsa.095860
I
0.682
POPTR_0001s40770
Populus trichocarpa
POPTR_0001s40770
I
0.682
Bra036016
Brassica rapa
Bra036016
I
0.682
Bo2g122260
Brassica oleracea
Bo2g122260
I
0.682
Eucgr.F01164
Eucalyptus grandis
Eucgr.F01164
I
0.682
AMTR_s00077p00176570
Amborella trichopoda
AMTR_s00077p00176570
I
0.682
27904.m000217
Ricinus communis
27904.m000217
I
0.681
TCM_031608
Theobroma cacao
TCM_031608
I
0.681
ATERF-4
Arabidopsis lyrata
scaffold_301765.1
I
0.681
Bo3g066710
Brassica oleracea
Bo3g066710
I
0.681
GLYMA06G35710
Glycine max
GLYMA06G35710
I
0.681
GLYMA12G26836
Glycine max
GLYMA12G26836
I
0.681
GLYMA12G35550
Glycine max
GLYMA12G35550
I
0.681
orange1.1g046280m.g
Citrus sinensis
orange1.1g046280m.g
I
0.681
Bra001588
Brassica rapa
Bra001588
I
0.681
GLYMA13G34920
Glycine max
GLYMA13G34920
I
0.681
orange1.1g028454m.g
Citrus sinensis
orange1.1g028454m.g
I
0.681
evm.TU.supercontig_44.73
Carica papaya
evm.TU.supercontig_44.73
I
0.681
29983.m003147
Ricinus communis
29983.m003147
I
0.681
Ciclev10006460m.g
Citrus clementina
Ciclev10006460m.g
I
0.681
Gorai.002G067600
Gossypium raimondii
Gorai.002G067600
I
0.681
Ciclev10009484m.g
Citrus clementina
Ciclev10009484m.g
I
0.681
evm.TU.supercontig_131.83
Carica papaya
evm.TU.supercontig_131.83
I
0.681
Bostr.28625s0184
Boechera stricta
Bostr.28625s0184
I
0.681
Gorai.009G375700
Gossypium raimondii
Gorai.009G375700
I
0.681
cassava46560.m1
Manihot esculenta
cassava46560.m1
I
0.681
ERF4
Arabidopsis thaliana
AT3G15210
D
0.681
cassava37846.valid.m1
Manihot esculenta
cassava37846.valid.m1
I
0.681
Bra039658
Brassica rapa
Bra039658
I
0.680
OPUNC02G31100
Oryza punctata
OPUNC02G31100
I
0.680
MDP0000236605
Malus domestica
MDP0000236605
I
0.680
MDP0000310904
Malus domestica
MDP0000310904
I
0.680
fgenesh2_kg.3__2537__AT3G23220.1
Arabidopsis lyrata
fgenesh2_kg.3__2537__AT3G23220.1
I
0.680
MTR_2g014340
Medicago truncatula
MTR_2g014340
I
0.679
Carubv10027246m.g
Capsella rubella
Carubv10027246m.g
I
0.679
cassava6588.valid.m1
Manihot esculenta
cassava6588.valid.m1
I
0.679
Cagra.0381s0006
Capsella grandiflora
Cagra.0381s0006
I
0.679
Gorai.008G155600
Gossypium raimondii
Gorai.008G155600
I
0.679
Cucsa.300100
Cucumis sativus
Cucsa.300100
I
0.679
PGSC0003DMG400023593
Solanum tuberosum
PGSC0003DMG400023593
I
0.678
LPERR02G27530
Leersia perrieri
LPERR02G27530
I
0.678
Solyc04g012050.2
Solanum lycopersicum
Solyc04g012050.2
I
0.678
Lus10039857.g
Linum usitatissimum
Lus10039857.g
I
0.678
MTR_4g078710
Medicago truncatula
MTR_4g078710
I
0.678
ORGLA02G0291300
Oryza glaberrima
ORGLA02G0291300
I
0.677
Bostr.19424s0625
Boechera stricta
Bostr.19424s0625
I
0.677
BGIOSGA005557
Oryza indica
BGIOSGA005557
I
0.677
Bo5g109800
Brassica oleracea
Bo5g109800
I
0.677
Bra035792
Brassica rapa
Bra035792
I
0.677
MTR_8g006815
Medicago truncatula
MTR_8g006815
I
0.677
OBART02G33690
Oryza barthii
OBART02G33690
I
0.677
OGLUM02G34120
Oryza glumaepatula
OGLUM02G34120
I
0.677
OMERI02G32080
Oryza meridionalis
OMERI02G32080
I
0.677
ONIVA02G33420
Oryza nivara
ONIVA02G33420
I
0.677