AMTR_s00061p00067260 (Amborella trichopoda)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		AMTR_s00061p00067260 T017002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN19033 ARID/BRIGHT 52 137
ERN19033 Sox 256 323

Links

Other ARID/BRIGHT,Sox family TFs
Other Amborella trichopoda TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28657.m000391 Ricinus communis 28657.m000391 N 0.752
VIT_19s0015g01770 Vitis vinifera VIT_19s0015g01770 N 0.745
cassava30583.valid.m1 Manihot esculenta cassava30583.valid.m1 N 0.737
Pm000293 Prunus mume Pm000293 N 0.732
PRUPE_ppa008470mg Prunus persica PRUPE_ppa008470mg N 0.732
Ciclev10008919m.g Citrus clementina Ciclev10008919m.g N 0.725
orange1.1g020460m.g Citrus sinensis orange1.1g020460m.g N 0.725
gene01438-v1.0-hybrid Fragaria vesca gene01438-v1.0-hybrid N 0.719
Pm009491 Prunus mume Pm009491 I 0.719
MDP0000307705 Malus domestica MDP0000307705 I 0.719
PK06884.1 Cannabis sativa PK06884.1 N 0.719
PRUPE_ppa026976mg Prunus persica PRUPE_ppa026976mg I 0.719
MDP0000257366 Malus domestica MDP0000257366 I 0.719
AMTR_s00089p00097770 Amborella trichopoda AMTR_s00089p00097770 I 0.713
TCM_030511 Theobroma cacao TCM_030511 I 0.712
POPTR_0011s17180 Populus trichocarpa POPTR_0011s17180 N 0.712
VIT_05s0029g00130 Vitis vinifera VIT_05s0029g00130 I 0.712
Gorai.013G147900 Gossypium raimondii Gorai.013G147900 N 0.711
evm.TU.supercontig_12.68 Carica papaya evm.TU.supercontig_12.68 I 0.709
GSMUA_Achr8G28470_001 Musa acuminata GSMUA_Achr8G28470_001 I 0.706
Eucgr.H00052 Eucalyptus grandis Eucgr.H00052 I 0.706
cassava14246.m1 Manihot esculenta cassava14246.m1 I 0.706
GSMUA_Achr6G21080_001 Musa acuminata GSMUA_Achr6G21080_001 I 0.706