CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_19s0015g01770
(
Vitis vinifera
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
VIT_19s0015g01770
T017092_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_19s0015g01770.t01
ARID/BRIGHT
53
138
SADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYE
VIT_19s0015g01770.t01
Sox
256
323
PKRSQSGYNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKGMIDKERYKTEMLEYR
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Vitis vinifera
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000293
Prunus mume
Pm000293
N
0.830
PRUPE_ppa008470mg
Prunus persica
PRUPE_ppa008470mg
N
0.830
Ciclev10008919m.g
Citrus clementina
Ciclev10008919m.g
N
0.810
orange1.1g020460m.g
Citrus sinensis
orange1.1g020460m.g
N
0.810
MDP0000257366
Malus domestica
MDP0000257366
I
0.804
28657.m000391
Ricinus communis
28657.m000391
N
0.791
cassava30583.valid.m1
Manihot esculenta
cassava30583.valid.m1
N
0.784
gene01438-v1.0-hybrid
Fragaria vesca
gene01438-v1.0-hybrid
N
0.778
POPTR_0011s17180
Populus trichocarpa
POPTR_0011s17180
N
0.778
TCM_030511
Theobroma cacao
TCM_030511
I
0.765
Gorai.013G147900
Gossypium raimondii
Gorai.013G147900
N
0.758
PK06884.1
Cannabis sativa
PK06884.1
N
0.758
AMTR_s00061p00067260
Amborella trichopoda
AMTR_s00061p00067260
N
0.745
MDP0000167232
Malus domestica
MDP0000167232
N
0.743
SapurV1A.0338s0260
Salix purpurea
SapurV1A.0338s0260
I
0.739
evm.TU.supercontig_12.68
Carica papaya
evm.TU.supercontig_12.68
I
0.732
Ca_20521
Cicer arietinum
Ca_20521
N
0.706
GLYMA04G12530
Glycine max
GLYMA04G12530
N
0.706