ENSAMEG00000005352 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000005352 T086707_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.794 0.923
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.794 0.923
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.794 0.923
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.794 0.923
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.794 0.923
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000005642 C2H2 ZF 151 173
ENSAMEP00000005642 C2H2 ZF 179 201
ENSAMEP00000005642 C2H2 ZF 207 229
ENSAMEP00000005642 C2H2 ZF 235 257
ENSAMEP00000005642 C2H2 ZF 263 285
ENSAMEP00000005642 C2H2 ZF 291 313
ENSAMEP00000005642 C2H2 ZF 319 341
ENSAMEP00000005642 C2H2 ZF 347 369
ENSAMEP00000005642 C2H2 ZF 375 397
ENSAMEP00000005642 C2H2 ZF 403 425
ENSAMEP00000005642 C2H2 ZF 431 453
ENSAMEP00000005642 C2H2 ZF 459 480
ENSAMEP00000005644 C2H2 ZF 164 186
ENSAMEP00000005644 C2H2 ZF 220 242
ENSAMEP00000005644 C2H2 ZF 248 270
ENSAMEP00000005644 C2H2 ZF 276 298
ENSAMEP00000005644 C2H2 ZF 304 326
ENSAMEP00000005644 C2H2 ZF 332 354
ENSAMEP00000005644 C2H2 ZF 360 382
ENSAMEP00000005644 C2H2 ZF 388 410
ENSAMEP00000005644 C2H2 ZF 416 438
ENSAMEP00000005644 C2H2 ZF 444 466
ENSAMEP00000005644 C2H2 ZF 472 494
ENSAMEP00000005644 C2H2 ZF 500 522
ENSAMEP00000005644 C2H2 ZF 528 550
ENSAMEP00000005644 C2H2 ZF 556 578
ENSAMEP00000005644 C2H2 ZF 584 606
ENSAMEP00000005644 C2H2 ZF 612 634
ENSAMEP00000005644 C2H2 ZF 640 662
ENSAMEP00000005651 C2H2 ZF 204 226
ENSAMEP00000005651 C2H2 ZF 232 254
ENSAMEP00000005651 C2H2 ZF 260 282
ENSAMEP00000005651 C2H2 ZF 288 310
ENSAMEP00000005651 C2H2 ZF 316 338
ENSAMEP00000005651 C2H2 ZF 344 366
ENSAMEP00000005651 C2H2 ZF 372 394
ENSAMEP00000005651 C2H2 ZF 400 422
ENSAMEP00000005651 C2H2 ZF 428 450
ENSAMEP00000005651 C2H2 ZF 456 478
ENSAMEP00000005651 C2H2 ZF 484 506
ENSAMEP00000005651 C2H2 ZF 512 534
ENSAMEP00000005651 C2H2 ZF 540 562
ENSAMEP00000005675 C2H2 ZF 337 359
ENSAMEP00000005675 C2H2 ZF 365 387
ENSAMEP00000005675 C2H2 ZF 393 415
ENSAMEP00000005675 C2H2 ZF 444 466
ENSAMEP00000005675 C2H2 ZF 472 494
ENSAMEP00000005678 C2H2 ZF 5 27
ENSAMEP00000005678 C2H2 ZF 33 55
ENSAMEP00000005678 C2H2 ZF 61 83
ENSAMEP00000005678 C2H2 ZF 89 111
ENSAMEP00000005678 C2H2 ZF 117 139
ENSAMEP00000005678 C2H2 ZF 145 167
ENSAMEP00000005678 C2H2 ZF 173 195
ENSAMEP00000005678 C2H2 ZF 201 223
ENSAMEP00000005678 C2H2 ZF 229 251
ENSAMEP00000005678 C2H2 ZF 257 279
ENSAMEP00000005678 C2H2 ZF 285 307
ENSAMEP00000005678 C2H2 ZF 313 335
ENSAMEP00000005678 C2H2 ZF 358 384
ENSAMEP00000005678 C2H2 ZF 390 412
ENSAMEP00000005678 C2H2 ZF 418 440
ENSAMEP00000005678 C2H2 ZF 446 468

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.827
ZNF250 Felis catus ENSFCAG00000013730 I 0.826
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.826
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.821
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.814
ZNF250 Sorex araneus ENSSARG00000004999 I 0.814
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.812
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.802
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.799
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.798
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.797
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.796
Zfp647 Mus musculus ENSMUSG00000054967 I 0.795
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.795
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.795
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.794
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.794
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.794
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.794
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.794
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.794
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.794
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.794
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.794
ZNF250 Homo sapiens ENSG00000196150 D 0.794
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.794
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.794
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.793
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.793
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.791
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.757