ZNF250 (Procavia capensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPCAG00000000092 T105637_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.800 0.946
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.800 0.946
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.800 0.946
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.800 0.946
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.800 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000000084 C2H2 ZF 199 221
ENSPCAP00000000084 C2H2 ZF 227 249
ENSPCAP00000000084 C2H2 ZF 255 277
ENSPCAP00000000084 C2H2 ZF 283 305
ENSPCAP00000000084 C2H2 ZF 311 333
ENSPCAP00000000084 C2H2 ZF 339 361
ENSPCAP00000000084 C2H2 ZF 367 389
ENSPCAP00000000084 C2H2 ZF 395 417
ENSPCAP00000000084 C2H2 ZF 423 445
ENSPCAP00000000084 C2H2 ZF 451 473
ENSPCAP00000000084 C2H2 ZF 479 501
ENSPCAP00000000084 C2H2 ZF 507 529
ENSPCAP00000000084 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Procavia capensis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.817
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.812
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.802
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.802
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.801
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.800
ZNF250 Homo sapiens ENSG00000196150 D 0.800
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.800
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.800
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.800
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.799
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.799
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.799
ZNF250 Sorex araneus ENSSARG00000004999 I 0.799
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.799
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.799
Zfp647 Mus musculus ENSMUSG00000054967 I 0.799
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.799
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.799
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.799
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.799
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.798
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.795
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.795
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.794
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.794
ZNF250 Felis catus ENSFCAG00000013730 I 0.794
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.793
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.779
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.773
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.773