POPTR_0003s20100 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0003s20100 T201184_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s20100.1 GRAS 48 471

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.956
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.917
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.900
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.890
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.865
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.865
30131.m007244 Ricinus communis 30131.m007244 N 0.857
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.851
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.837
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.834
TCM_042392 Theobroma cacao TCM_042392 N 0.834
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.834
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.830
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.820
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.807
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.798
TCM_040833 Theobroma cacao TCM_040833 N 0.784
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.779
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.777
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.775
Cla020893 Citrullus lanatus Cla020893 N 0.774
Pm012190 Prunus mume Pm012190 N 0.774
PK02707.1 Cannabis sativa PK02707.1 N 0.774
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.771
Pm029840 Prunus mume Pm029840 N 0.771
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.771
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.771
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.771
Pm016466 Prunus mume Pm016466 N 0.771
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.771
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.766
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.763
Ca_11133 Cicer arietinum Ca_11133 N 0.749
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.747
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.747
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.745
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.745
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.744
30024.m001746 Ricinus communis 30024.m001746 N 0.742
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.741
Ca_27441 Cicer arietinum Ca_27441 N 0.740
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.735
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.734
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.732
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.729
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.728
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.728
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.723
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.723
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.722
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.721
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.720
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.719
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.711
SCL3 Arabidopsis thaliana AT1G50420 N 0.705
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.705
Cla006433 Citrullus lanatus Cla006433 N 0.703
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.702