Thhalv10011447m.g (Eutrema salsugineum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Thhalv10011447m.g T203201_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011447m GRAS 54 476

Links

Other GRAS family TFs
Other Eutrema salsugineum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.949
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.946
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.943
Bra014251 Brassica rapa Bra014251 N 0.935
SCL3 Arabidopsis thaliana AT1G50420 N 0.935
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.930
Bo3g179450 Brassica oleracea Bo3g179450 N 0.927
Bo5g078760 Brassica oleracea Bo5g078760 N 0.915
Bo6g022200 Brassica oleracea Bo6g022200 N 0.905
Bra018848 Brassica rapa Bra018848 N 0.905
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.789
TCM_040833 Theobroma cacao TCM_040833 N 0.779
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.778
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.775
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.771
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.769
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.759
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.757
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.756
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.755
Pm012190 Prunus mume Pm012190 N 0.752
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.749
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.748
30024.m001746 Ricinus communis 30024.m001746 N 0.748
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.742
Cla006433 Citrullus lanatus Cla006433 N 0.741
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.740
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.740
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.737
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.737
Ca_27441 Cicer arietinum Ca_27441 N 0.737
Ca_11133 Cicer arietinum Ca_11133 N 0.737
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.736
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.735
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.730
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.727
30131.m007244 Ricinus communis 30131.m007244 N 0.727
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.727
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.723
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.722
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.720
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.719
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.718
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.718
TCM_042392 Theobroma cacao TCM_042392 N 0.714
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.714
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.714
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.711
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.710
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.710
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.708
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.707
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.705
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.705
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.705
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.703
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.703
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.702
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.702