Solyc12g099900.1 (Solanum lycopersicum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Solyc12g099900.1 T201595_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g099900.1.1 GRAS 47 465

Links

Other GRAS family TFs
Other Solanum lycopersicum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.984
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.866
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.840
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.825
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.814
TCM_040833 Theobroma cacao TCM_040833 N 0.811
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.797
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.797
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.793
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.792
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.789
Pm012190 Prunus mume Pm012190 N 0.786
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.784
Ca_27441 Cicer arietinum Ca_27441 N 0.781
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.778
Ca_11133 Cicer arietinum Ca_11133 N 0.777
30024.m001746 Ricinus communis 30024.m001746 N 0.775
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.775
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.773
mgf008315m Mimulus guttatus mgf008315m N 0.768
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.766
Cla006433 Citrullus lanatus Cla006433 N 0.764
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.762
mgf022906m Mimulus guttatus mgf022906m N 0.762
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.759
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.756
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.756
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.756
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.753
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.748
SCL3 Arabidopsis thaliana AT1G50420 N 0.748
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.747
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.747
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.747
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.745
30131.m007244 Ricinus communis 30131.m007244 N 0.745
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.740
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.740
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.737
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.737
TCM_042392 Theobroma cacao TCM_042392 N 0.734
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.734
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.732
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.732
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.729
PK02707.1 Cannabis sativa PK02707.1 N 0.729
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.729
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.728
Bra014251 Brassica rapa Bra014251 N 0.726
Bo3g179450 Brassica oleracea Bo3g179450 N 0.726
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.723
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.723
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.723
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.723
Pm016466 Prunus mume Pm016466 N 0.723
Pm029840 Prunus mume Pm029840 N 0.723
Bra018848 Brassica rapa Bra018848 N 0.723
Bo5g078760 Brassica oleracea Bo5g078760 N 0.718
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.718
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.718
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.717
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.712
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.712
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.708
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.707
Bo6g022200 Brassica oleracea Bo6g022200 N 0.705
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.704
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.703