Ciclev10031389m.g (Citrus clementina)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Ciclev10031389m.g T202418_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10031389m GRAS 49 475

Links

Other GRAS family TFs
Other Citrus clementina TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.992
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.882
30131.m007244 Ricinus communis 30131.m007244 N 0.879
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.868
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.868
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.867
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.866
TCM_042392 Theobroma cacao TCM_042392 N 0.864
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.860
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.856
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.856
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.850
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.837
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.837
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.820
Cla020893 Citrullus lanatus Cla020893 N 0.818
PK02707.1 Cannabis sativa PK02707.1 N 0.815
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.810
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.798
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.796
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.792
Pm029840 Prunus mume Pm029840 N 0.792
Pm016466 Prunus mume Pm016466 N 0.792
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.790
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.790
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.785
TCM_040833 Theobroma cacao TCM_040833 N 0.781
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.779
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.776
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.773
Pm012190 Prunus mume Pm012190 N 0.771
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.768
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.766
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.763
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.762
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.755
Ca_27441 Cicer arietinum Ca_27441 N 0.753
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.751
30024.m001746 Ricinus communis 30024.m001746 N 0.751
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.751
Ca_11133 Cicer arietinum Ca_11133 N 0.749
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.748
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.745
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.740
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.737
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.735
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.732
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.729
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.728
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.727
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.723
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.722
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.721
Cla006433 Citrullus lanatus Cla006433 N 0.719
SCL3 Arabidopsis thaliana AT1G50420 N 0.713
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.711
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.710
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.707
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.707
mgf022906m Mimulus guttatus mgf022906m N 0.707
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.707
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.705
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.702