F775_43210 (Aegilops tauschii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 F775_43210 T253968_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAD55_ORYSJ
M10962_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS55_01 		0.708 0.708
Q4U0F1_WHEAT
M10978_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT2_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT07746 MADS box 18 65

Links

Other MADS box family TFs
Other Aegilops tauschii TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 1.000
F775_04223 Aegilops tauschii F775_04223 I 0.958
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.958
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.896
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.896
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.896
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.896
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.896
Si019951m.g Setaria italica Si019951m.g I 0.896
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.875
OS09G0116800 Oryza sativa OS09G0116800 N 0.854
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.854
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.854
OBART01G45740 Oryza barthii OBART01G45740 N 0.854
OBART09G00850 Oryza barthii OBART09G00850 N 0.854
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.854
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.854
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.854
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.854
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.854
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.854
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.854
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.854
OS01G0975800 Oryza sativa OS01G0975800 N 0.854
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.854
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.854
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.854
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.854
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.854
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.854
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.833
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.828
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.812
OB01G55160 Oryza brachyantha OB01G55160 N 0.812
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.812
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.812
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.792
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.792
BRADI1G20090 Brachypodium distachyon BRADI1G20090 N 0.771
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.750
F775_23176 Aegilops tauschii F775_23176 N 0.750
F775_23542 Aegilops tauschii F775_23542 N 0.750
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.750
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.750
BRADI2G26320 Brachypodium distachyon BRADI2G26320 N 0.750
F775_21960 Aegilops tauschii F775_21960 N 0.733
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.729
Pavir.Bb00803 Panicum virgatum Pavir.Bb00803 N 0.729
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.729
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.729
Si038960m.g Setaria italica Si038960m.g N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.729
OPUNC09G08220 Oryza punctata OPUNC09G08220 N 0.729
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.729
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.729
MLOC_55767 Hordeum vulgare MLOC_55767 N 0.729
F775_52426 Aegilops tauschii F775_52426 N 0.729
OB06G21580 Oryza brachyantha OB06G21580 N 0.729
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.729
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.729
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.729
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
gw1.81.151.1 Physcomitrella patens gw1.81.151.1 N 0.708
gw1.88.220.1 Physcomitrella patens gw1.88.220.1 N 0.708
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
TRIUR3_22433 Triticum urartu TRIUR3_22433 N 0.708
MAD55_ORYSJ Oryza sativa MAD55_ORYSJ D 0.708
TRIUR3_03219 Triticum urartu TRIUR3_03219 I 0.708
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
BGIOSGA021662 Oryza indica BGIOSGA021662 I 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
BRADI1G45807 Brachypodium distachyon BRADI1G45807 I 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
BRADI3G18670 Brachypodium distachyon BRADI3G18670 N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
OB06G16920 Oryza brachyantha OB06G16920 I 0.708
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.708
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.708
Q4U0F1_WHEAT Triticum aestivum Q4U0F1_WHEAT D 0.708
Sb02g006700 Sorghum bicolor Sb02g006700 N 0.708
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.708
OS06G0217300 Oryza sativa OS06G0217300 I 0.708
OMERI06G08590 Oryza meridionalis OMERI06G08590 I 0.708
ORGLA06G0069900 Oryza glaberrima ORGLA06G0069900 I 0.708
OPUNC06G07080 Oryza punctata OPUNC06G07080 I 0.708
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.708
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.708
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.708
OBART06G13310 Oryza barthii OBART06G13310 N 0.708
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.708
Si032189m.g Setaria italica Si032189m.g N 0.708
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.708
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.708
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.708
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.708
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.708
OB08G28340 Oryza brachyantha OB08G28340 I 0.708
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.700