CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGACG00000018294
(
Gasterosteus aculeatus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSGACG00000018294
T260177_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.830
0.830
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.821
0.821
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000024186
MBD
1
71
MEKKRSDCPALPPGWRKEKVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGNEVDLGCFDFRTGKMLP
ENSGACP00000024186
MBD
89
148
AKGGKPDLNTALPIRQTASIFKQPVTKVTSHPSNKVKADLQRASEQPRQLFWERRLKGLQ
Links
Other
MBD
family TFs
Other
Gasterosteus aculeatus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTRUG00000006522
Takifugu rubripes
ENSTRUG00000006522
I
0.885
mbd2
Danio rerio
ENSDARG00000075952
I
0.882
ENSTNIG00000003709
Tetraodon nigroviridis
ENSTNIG00000003709
I
0.866
MBD2
Oryctolagus cuniculus
ENSOCUG00000021080
I
0.838
MBD2
Monodelphis domestica
ENSMODG00000011041
I
0.838
ENSMMUG00000003136
Macaca mulatta
ENSMMUG00000003136
I
0.838
MBD2
Gorilla gorilla
ENSGGOG00000013402
I
0.838
ENSPANG00000021858
Papio anubis
ENSPANG00000021858
I
0.838
MBD2
Homo sapiens
ENSG00000134046
D
0.838
MBD2
Pan troglodytes
ENSPTRG00000010033
I
0.838
ENSSTOG00000011253
Ictidomys tridecemlineatus
ENSSTOG00000011253
I
0.838
ENSAMEG00000017208
Ailuropoda melanoleuca
ENSAMEG00000017208
I
0.838
MBD2
Dasypus novemcinctus
ENSDNOG00000033421
I
0.838
MBD2
Loxodonta africana
ENSLAFG00000014135
I
0.838
MBD2
Sus scrofa
ENSSSCG00000004528
I
0.830
Mbd2
Rattus norvegicus
ENSRNOG00000011853
I
0.829
Mbd2
Mus musculus
ENSMUSG00000024513
D
0.829
MBD2
Otolemur garnettii
ENSOGAG00000008028
I
0.820
MBD2
Callithrix jacchus
ENSCJAG00000001862
I
0.820
MBD2
Tupaia belangeri
ENSTBEG00000015292
I
0.820
ENSPFOG00000003939
Poecilia formosa
ENSPFOG00000003939
I
0.810
mbd2.S
Xenopus laevis
XB-GENE-493780
I
0.807
ENSXMAG00000003932
Xiphophorus maculatus
ENSXMAG00000003932
I
0.802
MBD3
Tetraodon nigroviridis
ENSTNIG00000010627
N
0.786
MBD3
Gasterosteus aculeatus
ENSGACG00000012755
I
0.773
ENSLOCG00000003370
Lepisosteus oculatus
ENSLOCG00000003370
I
0.767
mbd3a
Danio rerio
ENSDARG00000061774
I
0.766
ENSONIG00000012635
Oreochromis niloticus
ENSONIG00000012635
I
0.756
ENSAMEG00000003491
Ailuropoda melanoleuca
ENSAMEG00000003491
I
0.756
ENSAMXG00000017952
Astyanax mexicanus
ENSAMXG00000017952
I
0.753
ENSOARG00000012359
Ovis aries
ENSOARG00000012359
I
0.747
ENSCSAG00000018106
Chlorocebus sabaeus
ENSCSAG00000018106
I
0.740
MBD3
Pteropus vampyrus
ENSPVAG00000017085
I
0.735
ENSP00000256429-D1
Bos grunniens
ENSP00000256429-D1
I
0.733
MBD2
Cavia porcellus
ENSCPOG00000006832
I
0.732
ENSECAG00000022368
Equus caballus
ENSECAG00000022368
I
0.732
ENSGMOG00000008953
Gadus morhua
ENSGMOG00000008953
I
0.729
mbd3.S
Xenopus laevis
XB-GENE-491557
I
0.725
ENSLACG00000016038
Latimeria chalumnae
ENSLACG00000016038
I
0.720
mbd3
Xenopus tropicalis
XB-GENE-491553
I
0.717
MBD3
Felis catus
ENSFCAG00000000763
I
0.716
Ogr03458
Ophisaurus gracilis
Ogr03458
I
0.713
ENSACAG00000008739
Anolis carolinensis
ENSACAG00000008739
I
0.705
MBD3
Equus caballus
ENSECAG00000015485
I
0.702
ENSXMAG00000012716
Xiphophorus maculatus
ENSXMAG00000012716
I
0.702