CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000012716
(
Xiphophorus maculatus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSXMAG00000012716
T260495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.750
0.750
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.738
0.738
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000012738
MBD
1
50
IFLISPSGKKFRSKPQLARYLGNQMDLSSFDFRTGKMLMSKLNKNRQRLR
ENSXMAP00000012738
MBD
36
114
KMLMSKLNKNRQRLRYDNNNQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPNNKVKTDPQKAVDQPRQLFWEKKLSGL
Links
Other
MBD
family TFs
Other
Xiphophorus maculatus
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000003491
Ailuropoda melanoleuca
ENSAMEG00000003491
I
0.897
MBD3
Tetraodon nigroviridis
ENSTNIG00000010627
N
0.881
ENSGMOG00000008953
Gadus morhua
ENSGMOG00000008953
I
0.869
MBD3
Felis catus
ENSFCAG00000000763
I
0.857
mbd3
Xenopus tropicalis
XB-GENE-491553
I
0.857
ENSAMXG00000017952
Astyanax mexicanus
ENSAMXG00000017952
I
0.857
mbd3.S
Xenopus laevis
XB-GENE-491557
I
0.857
ENSSHAG00000013346
Sarcophilus harrisii
ENSSHAG00000013346
N
0.857
MBD3
Homo sapiens
ENSG00000071655
N
0.845
ENSLACG00000016498
Latimeria chalumnae
ENSLACG00000016498
N
0.845
ENSPANG00000015324
Papio anubis
ENSPANG00000015324
N
0.845
Mbd3
Mus musculus
ENSMUSG00000035478
N
0.845
ENSPPYG00000009325
Pongo abelii
ENSPPYG00000009325
I
0.845
Pvit_09821
Pogona vitticeps
Pvit_09821
N
0.845
Mbd3
Rattus norvegicus
ENSRNOG00000028956
N
0.833
MBD3
Gasterosteus aculeatus
ENSGACG00000012755
I
0.833
ENSOARG00000012359
Ovis aries
ENSOARG00000012359
I
0.833
ENSLOCG00000006043
Lepisosteus oculatus
ENSLOCG00000006043
N
0.833
MBD3
Tursiops truncatus
ENSTTRG00000004412
N
0.833
Alligator_sinensis_CCG000430.1
Alligator sinensis
Alligator_sinensis_CCG000430.1
N
0.833
Myotis_brandtii_MBD3_10015627
Myotis brandtii
Myotis_brandtii_MBD3_10015627
N
0.833
MBD3
Canis familiaris
ENSCAFG00000019503
N
0.833
ENSAPLG00000003384
Anas platyrhynchos
ENSAPLG00000003384
N
0.833
mbd3b
Danio rerio
ENSDARG00000042029
I
0.833
ENSP00000156825
Macaca fascicularis
ENSP00000156825
N
0.833
MBD3
Monodelphis domestica
ENSMODG00000004125
N
0.833
ENSBTAP00000003926-D1
Bos grunniens
ENSBTAP00000003926-D1
N
0.833
MBD3
Dasypus novemcinctus
ENSDNOG00000031786
N
0.833
Brh_R003386
Buceros rhinoceros
Brh_R003386
N
0.821
Tal_R008196
Tyto alba
Tal_R008196
N
0.821
Afo_R010057
Aptenodytes forsteri
Afo_R010057
N
0.821
MBD3
Ornithorhynchus anatinus
ENSOANG00000003672
N
0.821
MBD3
Meleagris gallopavo
ENSMGAG00000002493
N
0.821
MBD3
Equus caballus
ENSECAG00000015485
I
0.821
mbd3a
Danio rerio
ENSDARG00000061774
I
0.821
MBD3
Pteropus vampyrus
ENSPVAG00000017085
I
0.810
MBD3
Ochotona princeps
ENSOPRG00000008719
I
0.798
ENSMPUG00000008045
Mustela putorius furo
ENSMPUG00000008045
N
0.764
Pvit_04402
Pogona vitticeps
Pvit_04402
I
0.762
ENSAPLG00000010058
Anas platyrhynchos
ENSAPLG00000010058
I
0.762
MBD2
Myotis lucifugus
ENSMLUG00000009980
I
0.762
Mbd2
Rattus norvegicus
ENSRNOG00000011853
I
0.762
ENSOARG00000004770
Ovis aries
ENSOARG00000004770
I
0.762
ENSCSAG00000018106
Chlorocebus sabaeus
ENSCSAG00000018106
I
0.750
Afo_R000663
Aptenodytes forsteri
Afo_R000663
I
0.750
MBD2
Homo sapiens
ENSG00000134046
D
0.750
Ogr03458
Ophisaurus gracilis
Ogr03458
I
0.750
MBD2
Monodelphis domestica
ENSMODG00000011041
I
0.750
ENSFCAG00000022047
Felis catus
ENSFCAG00000022047
I
0.750
MBD2
Microcebus murinus
ENSMICG00000008970
I
0.750
ENSP00000256429-D1
Bos grunniens
ENSP00000256429-D1
I
0.750
ENSP00000256429
Macaca fascicularis
ENSP00000256429
I
0.750
ENSMMUG00000003136
Macaca mulatta
ENSMMUG00000003136
I
0.750
MBD2
Dasypus novemcinctus
ENSDNOG00000033421
I
0.750
MBD2
Cavia porcellus
ENSCPOG00000006832
I
0.750
ENSECAG00000022368
Equus caballus
ENSECAG00000022368
I
0.750
ENSAMEG00000017208
Ailuropoda melanoleuca
ENSAMEG00000017208
I
0.750
ENSACAG00000008739
Anolis carolinensis
ENSACAG00000008739
I
0.750
MBD2
Pan troglodytes
ENSPTRG00000010033
I
0.750
MBD2
Loxodonta africana
ENSLAFG00000014135
I
0.750
ENSPANG00000021858
Papio anubis
ENSPANG00000021858
I
0.750
MBD2
Oryctolagus cuniculus
ENSOCUG00000021080
I
0.750
ENSLACG00000016038
Latimeria chalumnae
ENSLACG00000016038
I
0.750
ENSSTOG00000011253
Ictidomys tridecemlineatus
ENSSTOG00000011253
I
0.750
MBD2
Sus scrofa
ENSSSCG00000004528
I
0.750
MBD2
Gorilla gorilla
ENSGGOG00000013402
I
0.750
MBD2
Otolemur garnettii
ENSOGAG00000008028
I
0.750
MBD2
Callithrix jacchus
ENSCJAG00000001862
I
0.750
Gfo_R007597
Geospiza fortis
Gfo_R007597
N
0.739
Aan_R011698
Calypte anna
Aan_R011698
N
0.739
MBD2
Tupaia belangeri
ENSTBEG00000015292
I
0.738
Mbd2
Mus musculus
ENSMUSG00000024513
D
0.738
ENSTSYG00000013361
Tarsius syrichta
ENSTSYG00000013361
I
0.738
ENSMEUG00000016480
Macropus eugenii
ENSMEUG00000016480
I
0.726
mbd2.S
Xenopus laevis
XB-GENE-493780
I
0.714
ENSXMAG00000003932
Xiphophorus maculatus
ENSXMAG00000003932
I
0.714
ENSGACG00000018294
Gasterosteus aculeatus
ENSGACG00000018294
I
0.702
ENSTRUG00000006522
Takifugu rubripes
ENSTRUG00000006522
I
0.702
ENSLOCG00000003370
Lepisosteus oculatus
ENSLOCG00000003370
I
0.702