Bo8g082570 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo8g082570 T267564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.796 0.892
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.796 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g082570.1 Myb 11 58
Bo8g082570.1 Myb 64 109

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra006977 Brassica rapa Bra006977 I 0.862
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.838
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.825
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.825
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.825
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.816
Bo6g067190 Brassica oleracea Bo6g067190 I 0.798
MYB27 Arabidopsis thaliana AT3G53200 D 0.796
Bra028550 Brassica rapa Bra028550 I 0.790
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.786
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.738
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.726
TCM_022293 Theobroma cacao TCM_022293 I 0.716
PK10274.1 Cannabis sativa PK10274.1 I 0.707
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.699
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.695
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.694
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.694
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.694
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.693
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I 0.691
SapurV1A.0589s0170 Salix purpurea SapurV1A.0589s0170 I 0.687
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.682
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.680
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.679
OB05G11070 Oryza brachyantha OB05G11070 I 0.679
OBART05G01080 Oryza barthii OBART05G01080 I 0.679
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.679
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.679
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.679
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.679
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.679
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.679
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.679
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.678
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.678
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.678
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.678
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.678
OB01G54920 Oryza brachyantha OB01G54920 I 0.678
OBART01G45730 Oryza barthii OBART01G45730 I 0.678
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.677
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.677
Si023104m.g Setaria italica Si023104m.g I 0.677
MYBAS2 Oryza sativa OS12G0567300 I 0.677
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.677
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.677
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.677
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.677
OB12G23080 Oryza brachyantha OB12G23080 I 0.677
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.677
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.677
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.677
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.677
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.677
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.675
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.673
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.673
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.673
Bo1g098860 Brassica oleracea Bo1g098860 I 0.673
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.673
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.673
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.673
Bra001941 Brassica rapa Bra001941 I 0.673
Bra028369 Brassica rapa Bra028369 I 0.673
F775_29427 Aegilops tauschii F775_29427 I 0.673
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.673
MYB305 Arabidopsis thaliana AT3G24310 I 0.673
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.673
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.673
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.672
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.671
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.671
Si022826m.g Setaria italica Si022826m.g I 0.671
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.671
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.670
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.669
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.669
Bra015029 Brassica rapa Bra015029 I 0.669
Bo7g033260 Brassica oleracea Bo7g033260 I 0.669
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.669
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.669
Si024470m.g Setaria italica Si024470m.g I 0.669
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.668
F775_06315 Aegilops tauschii F775_06315 I 0.668
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.668
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.668
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.668
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.667
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.667
TCM_018971 Theobroma cacao TCM_018971 I 0.667
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.667
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.667
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.667
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.667
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.667
OB11G27690 Oryza brachyantha OB11G27690 I 0.666
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.665
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.665
Pm015392 Prunus mume Pm015392 I 0.665
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.664
Bo3g083130 Brassica oleracea Bo3g083130 I 0.664
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.664
Pm009050 Prunus mume Pm009050 I 0.664
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.664
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.664
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.664
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.664
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.664
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.664
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.664
mgf004640m Mimulus guttatus mgf004640m I 0.664
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.662
PGSC0003DMG400028282 Solanum tuberosum PGSC0003DMG400028282 N 0.661
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.661
GRMZM2G013581 Zea mays GRMZM2G013581 N 0.661
Solyc10g083900.1 Solanum lycopersicum Solyc10g083900.1 N 0.661
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.661
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.661