PK10274.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK10274.1 T290387_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.702 0.728
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.702 0.728
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK10274.1 Myb 16 63
PK10274.1 Myb 70 114

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.838
TCM_022293 Theobroma cacao TCM_022293 I 0.787
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.778
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.761
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.750
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.734
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.734
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.734
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.734
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.727
Bo6g067190 Brassica oleracea Bo6g067190 I 0.724
Bra028550 Brassica rapa Bra028550 I 0.724
Pm026334 Prunus mume Pm026334 N 0.723
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.721
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.713
PRUPE_ppa024805mg Prunus persica PRUPE_ppa024805mg N 0.712
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.710
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.708
Bra006977 Brassica rapa Bra006977 I 0.707
Ca_07872 Cicer arietinum Ca_07872 I 0.707
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.707
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.707
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.707
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.707
Bo8g082570 Brassica oleracea Bo8g082570 I 0.707
SapurV1A.0589s0170 Salix purpurea SapurV1A.0589s0170 I 0.706
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.705
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.704
MYB27 Arabidopsis thaliana AT3G53200 D 0.702
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.702
Pm009050 Prunus mume Pm009050 I 0.701
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.701
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.701
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.701
Lus10023918.g Linum usitatissimum Lus10023918.g N 0.700
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.699
F775_29427 Aegilops tauschii F775_29427 I 0.699
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.699
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.699
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.699
cassava15759.m1 Manihot esculenta cassava15759.m1 N 0.699
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.698
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.698
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.698
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.698
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.698
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.698
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.698
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.696
OB11G27690 Oryza brachyantha OB11G27690 I 0.694
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.691
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.691
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.691
Si023104m.g Setaria italica Si023104m.g I 0.691
MYBAS2 Oryza sativa OS12G0567300 I 0.691
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.691
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.691
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.691
F775_06315 Aegilops tauschii F775_06315 I 0.691
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.691
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.691
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.691
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.691
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.691
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.691
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.691
OB12G23080 Oryza brachyantha OB12G23080 I 0.691
Lus10014415.g Linum usitatissimum Lus10014415.g N 0.690
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I 0.690
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.685
Eucgr.K03562 Eucalyptus grandis Eucgr.K03562 I 0.683
OB01G54920 Oryza brachyantha OB01G54920 I 0.683
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.683
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.681
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.680
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.680
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.680
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.680
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.680
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.680
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.680
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.680
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.680
OBART01G45730 Oryza barthii OBART01G45730 I 0.680
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.679
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.678
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.678
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.678
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.678
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.678
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.677
Cla007745 Citrullus lanatus Cla007745 I 0.677
Solyc10g083900.1 Solanum lycopersicum Solyc10g083900.1 N 0.676
PGSC0003DMG400028282 Solanum tuberosum PGSC0003DMG400028282 N 0.676
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.675
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.675
Bo7g033260 Brassica oleracea Bo7g033260 I 0.675
Bra015029 Brassica rapa Bra015029 I 0.675
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.674
Cucsa.383230 Cucumis sativus Cucsa.383230 I 0.674
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.674
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.673
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.671
MDP0000183451 Malus domestica MDP0000183451 I 0.671
MDP0000133412 Malus domestica MDP0000133412 I 0.671
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.671
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.671
GLYMA04G26650 Glycine max GLYMA04G26650 I 0.671
GLYMA06G38340 Glycine max GLYMA06G38340 I 0.671
GLYMA20G34140 Glycine max GLYMA20G34140 I 0.671
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.671
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.671
Bra028369 Brassica rapa Bra028369 I 0.671
MYB305 Arabidopsis thaliana AT3G24310 I 0.671
Bo1g098860 Brassica oleracea Bo1g098860 I 0.671
Bo3g083130 Brassica oleracea Bo3g083130 I 0.671
Bra001941 Brassica rapa Bra001941 I 0.671
TCM_021037 Theobroma cacao TCM_021037 I 0.671
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.671
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.671
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.671
mgf004640m Mimulus guttatus mgf004640m I 0.671
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I 0.671
Ca_20437 Cicer arietinum Ca_20437 I 0.671
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.670
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I 0.669
Cla021798 Citrullus lanatus Cla021798 I 0.668
Cucsa.255900 Cucumis sativus Cucsa.255900 I 0.668
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.668
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.667
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.667
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.667
Gorai.008G137300 Gossypium raimondii Gorai.008G137300 I 0.666
Bostr.15654s0036 Boechera stricta Bostr.15654s0036 I 0.666
Carubv10010143m.g Capsella rubella Carubv10010143m.g I 0.666
Thhalv10012051m.g Eutrema salsugineum Thhalv10012051m.g I 0.666
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.666
TCM_018971 Theobroma cacao TCM_018971 I 0.664
MYB112 Arabidopsis thaliana AT1G48000 I 0.663
MYB112 Arabidopsis lyrata fgenesh2_kg.1__3889__AT1G48000.1 I 0.663
Pm015392 Prunus mume Pm015392 I 0.662
OB07G32480 Oryza brachyantha OB07G32480 I 0.661
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.661
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.661
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.661