AtMYB27 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_08s0007g04830 T281971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.729 0.763
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.729 0.763
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.664 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0007g04830.t01 Myb 8 55
VIT_08s0007g04830.t01 Myb 61 106

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK10274.1 Cannabis sativa PK10274.1 I 0.838
TCM_022293 Theobroma cacao TCM_022293 I 0.808
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.793
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.791
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.761
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.756
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.754
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.754
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.754
SapurV1A.0589s0170 Salix purpurea SapurV1A.0589s0170 I 0.752
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.749
Bra028550 Brassica rapa Bra028550 I 0.745
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.742
Bo6g067190 Brassica oleracea Bo6g067190 I 0.742
Bra006977 Brassica rapa Bra006977 I 0.738
Bo8g082570 Brassica oleracea Bo8g082570 I 0.738
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.737
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.737
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.734
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.734
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.734
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.734
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.734
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.734
Pm009050 Prunus mume Pm009050 I 0.734
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.734
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.734
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.731
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.731
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.731
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.730
MYB27 Arabidopsis thaliana AT3G53200 D 0.729
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.729
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.729
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.728
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.728
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.728
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.728
cassava15759.m1 Manihot esculenta cassava15759.m1 N 0.720
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.719
F775_29427 Aegilops tauschii F775_29427 I 0.717
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.717
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.717
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.717
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.716
Pm026334 Prunus mume Pm026334 N 0.713
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.713
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.712
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.712
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.712
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.712
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.712
Si023104m.g Setaria italica Si023104m.g I 0.712
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.712
OB12G23080 Oryza brachyantha OB12G23080 I 0.712
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.712
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.712
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.712
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.712
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.712
F775_06315 Aegilops tauschii F775_06315 I 0.712
MYBAS2 Oryza sativa OS12G0567300 I 0.712
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.712
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.711
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.710
Lus10014415.g Linum usitatissimum Lus10014415.g N 0.710
AtMYB27 Populus trichocarpa POPTR_0006s12400 N 0.708
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.707
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.707
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.707
OBART01G45730 Oryza barthii OBART01G45730 I 0.707
OB01G54920 Oryza brachyantha OB01G54920 I 0.707
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.707
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.707
PRUPE_ppa024805mg Prunus persica PRUPE_ppa024805mg N 0.705
Ca_07872 Cicer arietinum Ca_07872 I 0.705
Bo3g083130 Brassica oleracea Bo3g083130 I 0.704
Bo1g098860 Brassica oleracea Bo1g098860 I 0.704
MYB305 Arabidopsis thaliana AT3G24310 I 0.704
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.704
Bra028369 Brassica rapa Bra028369 I 0.704
Bra001941 Brassica rapa Bra001941 I 0.704
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.704
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.704
Cla021798 Citrullus lanatus Cla021798 I 0.704
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.704
Cucsa.255900 Cucumis sativus Cucsa.255900 I 0.704
TCM_021037 Theobroma cacao TCM_021037 I 0.704
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I 0.704
mgf004640m Mimulus guttatus mgf004640m I 0.704
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.704
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.703
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.702
MDP0000183451 Malus domestica MDP0000183451 I 0.701
MDP0000133412 Malus domestica MDP0000133412 I 0.701
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.701
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.701
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.700
Bo7g033260 Brassica oleracea Bo7g033260 I 0.700
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.700
Bra015029 Brassica rapa Bra015029 I 0.700
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.699
Lus10023918.g Linum usitatissimum Lus10023918.g N 0.699
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.699
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.698
OB11G27690 Oryza brachyantha OB11G27690 I 0.698
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.698
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.698
gene09683-v1.0-hybrid Fragaria vesca gene09683-v1.0-hybrid I 0.697
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.697
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.695
Ca_20437 Cicer arietinum Ca_20437 I 0.695
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.695
Cucsa.383230 Cucumis sativus Cucsa.383230 I 0.694
Cla007745 Citrullus lanatus Cla007745 I 0.694
GLYMA04G26650 Glycine max GLYMA04G26650 I 0.693
GLYMA06G38340 Glycine max GLYMA06G38340 I 0.693
Eucgr.K03562 Eucalyptus grandis Eucgr.K03562 I 0.691
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.690
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.690
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.690
GLYMA20G34140 Glycine max GLYMA20G34140 I 0.690
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.688
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.688
OB05G11070 Oryza brachyantha OB05G11070 I 0.688
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.688
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.688
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.688
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.688
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.688
OBART05G01080 Oryza barthii OBART05G01080 I 0.688
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.688
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.688
PGSC0003DMG400028282 Solanum tuberosum PGSC0003DMG400028282 N 0.686
Solyc10g083900.1 Solanum lycopersicum Solyc10g083900.1 N 0.686
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.686
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.685
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.684
OB07G32480 Oryza brachyantha OB07G32480 I 0.684
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.684
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.684
PGSC0003DMG402004611 Solanum tuberosum PGSC0003DMG402004611 I 0.683
TCM_018971 Theobroma cacao TCM_018971 I 0.683
Solyc12g099140.1 Solanum lycopersicum Solyc12g099140.1 I 0.683
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I 0.682
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.682
Si022826m.g Setaria italica Si022826m.g I 0.681
TCM_004878 Theobroma cacao TCM_004878 I 0.681
Bostr.15654s0036 Boechera stricta Bostr.15654s0036 I 0.681
Thhalv10012051m.g Eutrema salsugineum Thhalv10012051m.g I 0.681
MYB112 Arabidopsis thaliana AT1G48000 I 0.681
MYB112 Arabidopsis lyrata fgenesh2_kg.1__3889__AT1G48000.1 I 0.681
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.680
MDP0000823458 Malus domestica MDP0000823458 I 0.679
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.679
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.679
Pm015392 Prunus mume Pm015392 I 0.678
Cucsa.306580 Cucumis sativus Cucsa.306580 N 0.678
Carubv10010143m.g Capsella rubella Carubv10010143m.g I 0.677
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.676
Si024470m.g Setaria italica Si024470m.g I 0.676
GLYMA15G14190 Glycine max GLYMA15G14190 I 0.676
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.676
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I 0.676
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.676
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.676
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.675
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.675
F775_14172 Aegilops tauschii F775_14172 I 0.675
GLYMA10G33450 Glycine max GLYMA10G33450 I 0.675
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.675
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I 0.674
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I 0.674
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.674
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.673
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.673
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.673
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.673
Gorai.008G137300 Gossypium raimondii Gorai.008G137300 I 0.672
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I 0.671
Carubv10007255m.g Capsella rubella Carubv10007255m.g I 0.671
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.670
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.670
BRADI4G09900 Brachypodium distachyon BRADI4G09900 I 0.669
GRMZM2G013581 Zea mays GRMZM2G013581 N 0.668
30076.m004607 Ricinus communis 30076.m004607 I 0.667
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.667
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.666
Gorai.007G121000 Gossypium raimondii Gorai.007G121000 I 0.665
AtMYB79 Arabidopsis thaliana AT4G13480 I 0.665
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I 0.665
Bo9g009020 Brassica oleracea Bo9g009020 I 0.664
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.664
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.664
Bo7g088650 Brassica oleracea Bo7g088650 I 0.664
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.664
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.664
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.664
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.664
Bra025410 Brassica rapa Bra025410 I 0.664
Si022831m.g Setaria italica Si022831m.g I 0.663
Si026574m.g Setaria italica Si026574m.g I 0.663
OB12G22880 Oryza brachyantha OB12G22880 I 0.663
Sb08g018370 Sorghum bicolor Sb08g018370 I 0.663
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I 0.663
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I 0.663
OB11G27320 Oryza brachyantha OB11G27320 I 0.663
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I 0.663
Sb05g026820 Sorghum bicolor Sb05g026820 I 0.663
JAMYB Oryza sativa OS11G0684000 I 0.663
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I 0.663
GRMZM2G143046 Zea mays GRMZM2G143046 I 0.663
GRMZM2G131442 Zea mays GRMZM2G131442 I 0.663
GLYMA10G06680 Glycine max GLYMA10G06680 N 0.663
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.663
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.663
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.663
BGIOSGA035999 Oryza indica BGIOSGA035999 I 0.663
GSMUA_Achr11G04930_001 Musa acuminata GSMUA_Achr11G04930_001 I 0.662
MDP0000286143 Malus domestica MDP0000286143 I 0.661