GLYMA01G15258 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA01G15258 T322558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.979 0.920
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.934 0.813
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.927 0.800
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G15258.1 SBP 172 246

Links

Other SBP family TFs
Other Glycine max TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.982
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.981
TCM_005622 Theobroma cacao TCM_005622 I 0.981
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.981
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.981
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.981
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.981
Ca_18942 Cicer arietinum Ca_18942 I 0.981
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.981
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.981
PK25779.1 Cannabis sativa PK25779.1 I 0.981
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.981
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.981
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.981
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.981
30174.m008803 Ricinus communis 30174.m008803 I 0.981
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.981
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.981
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.981
Cla006776 Citrullus lanatus Cla006776 I 0.980
mgf016085m Mimulus guttatus mgf016085m I 0.980
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.979
Bra033221 Brassica rapa Bra033221 I 0.979
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.979
Bo8g118210 Brassica oleracea Bo8g118210 I 0.979
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.979
Bo5g001290 Brassica oleracea Bo5g001290 I 0.979
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.979
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.979
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.979
SPL8 Arabidopsis thaliana AT1G02065 D 0.979
Bra032662 Brassica rapa Bra032662 I 0.979
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.979
MDP0000803116 Malus domestica MDP0000803116 I 0.978
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.977
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.977
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.977
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.977
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.976
Cucsa.120620 Cucumis sativus Cucsa.120620 I 0.970
PRUPE_ppa008560mg Prunus persica PRUPE_ppa008560mg I 0.969
Pm017777 Prunus mume Pm017777 I 0.969
cassava13944.valid.m1 Manihot esculenta cassava13944.valid.m1 I 0.966
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.953
fgenesh1_pg.scaffold_23000047 Physcomitrella patens fgenesh1_pg.scaffold_23000047 I 0.952
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.944
SPL8 Oryza sativa OS04G0656500 I 0.943
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.943
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.943
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.943
Si022315m.g Setaria italica Si022315m.g I 0.943
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.943
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.943
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.943
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.943
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.943
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.943
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.943
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.943
OBART04G27990 Oryza barthii OBART04G27990 I 0.943
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.943
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.943
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.943
OB04G34990 Oryza brachyantha OB04G34990 I 0.943
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.943
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.943
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.942
OB02G15090 Oryza brachyantha OB02G15090 I 0.941
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.941
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.941
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.941
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.940
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.940
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.940
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.940
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.937
OB06G31100 Oryza brachyantha OB06G31100 I 0.937
MLOC_326 Hordeum vulgare MLOC_326 I 0.937
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.937
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.937
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.937
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.937
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.937
SPL10 Oryza sativa OS06G0659100 I 0.937
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.937
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.937
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.937
Si006559m.g Setaria italica Si006559m.g I 0.937
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.937
SPL10 Oryza indica BGIOSGA023408 I 0.937
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.937
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.935
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.934
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.934
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.933
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.932
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.932
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.932
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.932
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.930
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.927
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.927
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.926
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.926
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.925
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.924
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.923
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.923
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.923
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.922
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.922
OBART06G23500 Oryza barthii OBART06G23500 I 0.914
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.913
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.911
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.909
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.903
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.903
SPL5 Oryza sativa OS02G0177300 I 0.903
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.903
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.902
Si017338m.g Setaria italica Si017338m.g I 0.902
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.901
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.900
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.896
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.890