CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Oryctolagus cuniculus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSOCUG00000010641
T168160_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000009169
CxxC
31
77
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Oryctolagus cuniculus
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28152.m000908
Ricinus communis
28152.m000908
I
0.000
29661.m000908
Ricinus communis
29661.m000908
I
0.000
30170.m013751
Ricinus communis
30170.m013751
I
0.000
AC211702.2_FG002
Zea mays
AC211702.2_FG002
I
0.000
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
0.000
ZAT10
Arabidopsis thaliana
AT1G27730
D
0.000
ZAT4
Arabidopsis thaliana
AT2G45120
D
0.000
AZF2
Arabidopsis thaliana
AT3G19580
D
0.000
ZAT9
Arabidopsis thaliana
AT3G60580
D
0.000
ZAT6
Arabidopsis thaliana
AT5G04340
D
0.000
AZF3
Arabidopsis thaliana
AT5G43170
I
0.000
AZF1
Arabidopsis thaliana
AT5G67450
D
0.000
Bo1g081350
Brassica oleracea
Bo1g081350
I
0.000
Bo1g113530
Brassica oleracea
Bo1g113530
I
0.000
Bo2g161550
Brassica oleracea
Bo2g161550
N
0.000
Bo2g168030
Brassica oleracea
Bo2g168030
I
0.000
Bo3g037560
Brassica oleracea
Bo3g037560
I
0.000
Bo3g142840
Brassica oleracea
Bo3g142840
I
0.000
Bo4g195370
Brassica oleracea
Bo4g195370
I
0.000
Bo5g113850
Brassica oleracea
Bo5g113850
I
0.000
Bo7g048650
Brassica oleracea
Bo7g048650
I
0.000
Bo7g065200
Brassica oleracea
Bo7g065200
I
0.000
Bo9g019120
Brassica oleracea
Bo9g019120
I
0.000
Bo9g181170
Brassica oleracea
Bo9g181170
I
0.000
Bostr.13158s0058
Boechera stricta
Bostr.13158s0058
I
0.000
Bostr.15697s0099
Boechera stricta
Bostr.15697s0099
I
0.000
Bostr.19424s0704
Boechera stricta
Bostr.19424s0704
I
0.000
Bostr.2128s0015
Boechera stricta
Bostr.2128s0015
I
0.000
Bostr.25993s0262
Boechera stricta
Bostr.25993s0262
I
0.000
Bostr.26675s0176
Boechera stricta
Bostr.26675s0176
I
0.000
Bostr.3148s0159
Boechera stricta
Bostr.3148s0159
I
0.000
Bra000372
Brassica rapa
Bra000372
I
0.000
Bra009464
Brassica rapa
Bra009464
I
0.000
Bra010922
Brassica rapa
Bra010922
I
0.000
Bra012914
Brassica rapa
Bra012914
I
0.000
Bra018817
Brassica rapa
Bra018817
I
0.000
Bra022436
Brassica rapa
Bra022436
I
0.000
Bra029315
Brassica rapa
Bra029315
N
0.000
Bra029985
Brassica rapa
Bra029985
I
0.000
Bra031834
Brassica rapa
Bra031834
I
0.000
Bra033666
Brassica rapa
Bra033666
I
0.000
Bra037845
Brassica rapa
Bra037845
I
0.000
Bra038219
Brassica rapa
Bra038219
I
0.000
Bra040325
Brassica rapa
Bra040325
I
0.000
BRADI1G14750
Brachypodium distachyon
BRADI1G14750
I
0.000
BRADI1G16010
Brachypodium distachyon
BRADI1G16010
I
0.000
BRADI4G03340
Brachypodium distachyon
BRADI4G03340
I
0.000
Cagra.0239s0063
Capsella grandiflora
Cagra.0239s0063
I
0.000
Cagra.6011s0004
Capsella grandiflora
Cagra.6011s0004
I
0.000
Cagra.6943s0031
Capsella grandiflora
Cagra.6943s0031
I
0.000
Cagra.9217s0012
Capsella grandiflora
Cagra.9217s0012
I
0.000
Carubv10001868m.g
Capsella rubella
Carubv10001868m.g
I
0.000
Carubv10014391m.g
Capsella rubella
Carubv10014391m.g
I
0.000
Carubv10017660m.g
Capsella rubella
Carubv10017660m.g
I
0.000
Carubv10023569m.g
Capsella rubella
Carubv10023569m.g
I
0.000
cassava12475.valid.m1
Manihot esculenta
cassava12475.valid.m1
I
0.000
cassava32957.m1
Manihot esculenta
cassava32957.m1
I
0.000
cassava35732.valid.m1
Manihot esculenta
cassava35732.valid.m1
I
0.000
cassava43667.valid.m1
Manihot esculenta
cassava43667.valid.m1
I
0.000
Ca_01586
Cicer arietinum
Ca_01586
I
0.000
Ca_18364
Cicer arietinum
Ca_18364
I
0.000
Ca_23672
Cicer arietinum
Ca_23672
I
0.000
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
0.000
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
0.000
chr5.CM0096.480.nc
Lotus japonicus
chr5.CM0096.480.nc
I
0.000
chr5.CM0200.550.nc
Lotus japonicus
chr5.CM0200.550.nc
I
0.000
Ciclev10002297m.g
Citrus clementina
Ciclev10002297m.g
I
0.000
Ciclev10020499m.g
Citrus clementina
Ciclev10020499m.g
I
0.000
Ciclev10029065m.g
Citrus clementina
Ciclev10029065m.g
I
0.000
Cla001400
Citrullus lanatus
Cla001400
I
0.000
Cla022966
Citrullus lanatus
Cla022966
I
0.000
Cucsa.219210
Cucumis sativus
Cucsa.219210
I
0.000
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
0.000
Cucsa.395710
Cucumis sativus
Cucsa.395710
I
0.000
Eucgr.G01247
Eucalyptus grandis
Eucgr.G01247
I
0.000
evm.TU.supercontig_2070.1
Carica papaya
evm.TU.supercontig_2070.1
I
0.000
evm.TU.supercontig_6.32
Carica papaya
evm.TU.supercontig_6.32
I
0.000
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.000
STZ
Arabidopsis lyrata
fgenesh2_kg.1__2932__AT1G27730.1
I
0.000
AZF2
Arabidopsis lyrata
fgenesh2_kg.3__2173__AT3G19580.2
I
0.000
fgenesh2_kg.4__2705__AT2G45120.1
Arabidopsis lyrata
fgenesh2_kg.4__2705__AT2G45120.1
I
0.000
gene02558-v1.0-hybrid
Fragaria vesca
gene02558-v1.0-hybrid
I
0.000
GLYMA01G18606
Glycine max
GLYMA01G18606
I
0.000
GLYMA01G32981
Glycine max
GLYMA01G32981
I
0.000
GLYMA03G03950
Glycine max
GLYMA03G03950
I
0.000
GLYMA04G04760
Glycine max
GLYMA04G04760
I
0.000
GLYMA06G04840
Glycine max
GLYMA06G04840
I
0.000
GLYMA14G09760
Glycine max
GLYMA14G09760
I
0.000
GLYMA17G35430
Glycine max
GLYMA17G35430
I
0.000
Gorai.001G175400
Gossypium raimondii
Gorai.001G175400
I
0.000
Gorai.002G132600
Gossypium raimondii
Gorai.002G132600
I
0.000
Gorai.004G164000
Gossypium raimondii
Gorai.004G164000
I
0.000
Gorai.005G232300
Gossypium raimondii
Gorai.005G232300
I
0.000
Gorai.008G020700
Gossypium raimondii
Gorai.008G020700
I
0.000
Gorai.010G025200
Gossypium raimondii
Gorai.010G025200
I
0.000
Gorai.013G050100
Gossypium raimondii
Gorai.013G050100
I
0.000
GRMZM2G455889
Zea mays
GRMZM2G455889
I
0.000
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
0.000
LPERR03G21480
Leersia perrieri
LPERR03G21480
I
0.000
Lus10009278.g
Linum usitatissimum
Lus10009278.g
I
0.000
MDP0000198015
Malus domestica
MDP0000198015
I
0.000
MDP0000319225
Malus domestica
MDP0000319225
I
0.000
MDP0000573176
Malus domestica
MDP0000573176
I
0.000
MDP0000762756
Malus domestica
MDP0000762756
I
0.000
mgf006006m
Mimulus guttatus
mgf006006m
I
0.000
mgf021789m
Mimulus guttatus
mgf021789m
I
0.000
MLOC_51405
Hordeum vulgare
MLOC_51405
I
0.000
MLOC_70662
Hordeum vulgare
MLOC_70662
I
0.000
MTR_0160s0030
Medicago truncatula
MTR_0160s0030
I
0.000
MTR_1g018420
Medicago truncatula
MTR_1g018420
I
0.000
MTR_1g106730
Medicago truncatula
MTR_1g106730
I
0.000
MTR_3g102980
Medicago truncatula
MTR_3g102980
I
0.000
MTR_4g027440
Medicago truncatula
MTR_4g027440
I
0.000
OB03G42170
Oryza brachyantha
OB03G42170
I
0.000
orange1.1g024499m.g
Citrus sinensis
orange1.1g024499m.g
I
0.000
orange1.1g038669m.g
Citrus sinensis
orange1.1g038669m.g
I
0.000
orange1.1g044606m.g
Citrus sinensis
orange1.1g044606m.g
I
0.000
Pavir.J15304
Panicum virgatum
Pavir.J15304
N
0.000
Pavir.J16973
Panicum virgatum
Pavir.J16973
N
0.000
PGSC0003DMG400002383
Solanum tuberosum
PGSC0003DMG400002383
I
0.000
PGSC0003DMG400011548
Solanum tuberosum
PGSC0003DMG400011548
I
0.000
PGSC0003DMG400026020
Solanum tuberosum
PGSC0003DMG400026020
I
0.000
PGSC0003DMG400034322
Solanum tuberosum
PGSC0003DMG400034322
I
0.000
PGSC0003DMG400041467
Solanum tuberosum
PGSC0003DMG400041467
I
0.000
PGSC0003DMG400045547
Solanum tuberosum
PGSC0003DMG400045547
I
0.000
PK10188.1
Cannabis sativa
PK10188.1
I
0.000
Pm005390
Prunus mume
Pm005390
I
0.000
Pm021284
Prunus mume
Pm021284
I
0.000
POPTR_0002s12010
Populus trichocarpa
POPTR_0002s12010
I
0.000
POPTR_0002s14460
Populus trichocarpa
POPTR_0002s14460
I
0.000
POPTR_0009s09250
Populus trichocarpa
POPTR_0009s09250
I
0.000
POPTR_0014s01760
Populus trichocarpa
POPTR_0014s01760
I
0.000
PRUPE_ppa009924mg
Prunus persica
PRUPE_ppa009924mg
I
0.000
PRUPE_ppa011060mg
Prunus persica
PRUPE_ppa011060mg
I
0.000
SapurV1A.0005s0440
Salix purpurea
SapurV1A.0005s0440
I
0.000
SapurV1A.0019s0280
Salix purpurea
SapurV1A.0019s0280
I
0.000
SapurV1A.0033s0440
Salix purpurea
SapurV1A.0033s0440
I
0.000
SapurV1A.0248s0230
Salix purpurea
SapurV1A.0248s0230
I
0.000
SapurV1A.0845s0100
Salix purpurea
SapurV1A.0845s0100
I
0.000
Sb02g038000
Sorghum bicolor
Sb02g038000
N
0.000
scaffold_503291.1
Arabidopsis lyrata
scaffold_503291.1
I
0.000
C2H2
Arabidopsis lyrata
scaffold_600374.1
I
0.000
AZF3
Arabidopsis lyrata
scaffold_800768.1
I
0.000
Solyc01g090840.2
Solanum lycopersicum
Solyc01g090840.2
I
0.000
Solyc01g107170.2
Solanum lycopersicum
Solyc01g107170.2
I
0.000
Solyc12g088390.1
Solanum lycopersicum
Solyc12g088390.1
I
0.000
TCM_000780
Theobroma cacao
TCM_000780
I
0.000
TCM_007214
Theobroma cacao
TCM_007214
I
0.000
TCM_034720
Theobroma cacao
TCM_034720
I
0.000
Thhalv10001538m.g
Eutrema salsugineum
Thhalv10001538m.g
I
0.000
Thhalv10010909m.g
Eutrema salsugineum
Thhalv10010909m.g
I
0.000
Thhalv10014546m.g
Eutrema salsugineum
Thhalv10014546m.g
I
0.000
Thhalv10021307m.g
Eutrema salsugineum
Thhalv10021307m.g
I
0.000
Traes_2BS_DD07C2EE6
Triticum aestivum
Traes_2BS_DD07C2EE6
N
0.000
Traes_4BS_FE945D2FC
Triticum aestivum
Traes_4BS_FE945D2FC
I
0.000
VIT_03s0091g00690
Vitis vinifera
VIT_03s0091g00690
I
0.000
VIT_07s0129g00240
Vitis vinifera
VIT_07s0129g00240
I
0.000
VIT_15s0021g02720
Vitis vinifera
VIT_15s0021g02720
I
0.000
VIT_18s0001g09230
Vitis vinifera
VIT_18s0001g09230
I
0.000