LPERR01G31650 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR01G31650 T273648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.746 0.879
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.718 0.814
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.675 0.771
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.675 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G31650.1 Myb 64 110
LPERR01G31650.1 Myb 116 162
LPERR01G31650.1 Myb 168 213
LPERR01G31650.2 Myb 64 110
LPERR01G31650.2 Myb 116 162
LPERR01G31650.2 Myb 168 213

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
F775_10696 Aegilops tauschii F775_10696 N 0.000
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.000
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.000
LPERR02G09420 Leersia perrieri LPERR02G09420 N 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.000
OB02G19930 Oryza brachyantha OB02G19930 N 0.000
OBART02G11160 Oryza barthii OBART02G11160 I 0.000
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.000
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.000
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.000
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.000
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.000
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.000
OS02G0258200 Oryza sativa OS02G0258200 N 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000