CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NFX1
(
Loxodonta africana
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
ENSLAFG00000012270
T300495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000010254
NFX
452
469
CPHSCNLLCHPGPCPPCP
ENSLAFP00000010254
NFX
505
523
CGQHHCAELCHGGQCQPCR
ENSLAFP00000010254
NFX
566
584
CGNHTCSQVCHPQPCQLCP
ENSLAFP00000010254
NFX
621
653
CGKVCGKPLPCGSLDFIHTCEKLCHEGDCGPCS
ENSLAFP00000010254
NFX
694
706
CGRHKCNEICCVD
ENSLAFP00000010254
NFX
721
739
CGLHRCEEPCHRGNCQTCW
Links
Other
NFX
family TFs
Other
Loxodonta africana
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30167.m000856
Ricinus communis
30167.m000856
I
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
BRC2
Arabidopsis thaliana
AT1G68800
I
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
Bra004097
Brassica rapa
Bra004097
I
BRADI3G36590
Brachypodium distachyon
BRADI3G36590
N
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
chr4.LjB15O07.110.nc
Lotus japonicus
chr4.LjB15O07.110.nc
I
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
Cla002355
Citrullus lanatus
Cla002355
I
Cucsa.113660
Cucumis sativus
Cucsa.113660
N
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
F775_01923
Aegilops tauschii
F775_01923
I
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
GLYMA04G22407
Glycine max
GLYMA04G22407
I
GLYMA17G13065
Glycine max
GLYMA17G13065
I
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
GRMZM2G031905
Zea mays
GRMZM2G031905
I
GRMZM2G060319
Zea mays
GRMZM2G060319
I
GRMZM2G062711
Zea mays
GRMZM2G062711
I
GRMZM2G064628
Zea mays
GRMZM2G064628
I
GRMZM2G110242
Zea mays
GRMZM2G110242
I
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
LjSGA_018294.2
Lotus japonicus
LjSGA_018294.2
I
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
MDP0000272980
Malus domestica
MDP0000272980
I
mgf022233m
Mimulus guttatus
mgf022233m
I
mgf024687m
Mimulus guttatus
mgf024687m
I
mgf026636m
Mimulus guttatus
mgf026636m
I
MLOC_4614
Hordeum vulgare
MLOC_4614
I
MLOC_58142
Hordeum vulgare
MLOC_58142
I
MLOC_70116
Hordeum vulgare
MLOC_70116
I
OBART08G15630
Oryza barthii
OBART08G15630
N
OBART09G10040
Oryza barthii
OBART09G10040
I
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
OPUNC03G28490
Oryza punctata
OPUNC03G28490
I
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
OS09G0410500
Oryza sativa
OS09G0410500
I
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
PK12240.1
Cannabis sativa
PK12240.1
D
Pm015499
Prunus mume
Pm015499
I
Pm030202
Prunus mume
Pm030202
I
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
Sb01g010690
Sorghum bicolor
Sb01g010690
I
Sb02g024450
Sorghum bicolor
Sb02g024450
I
Sb07g021140
Sorghum bicolor
Sb07g021140
I
Si015230m.g
Setaria italica
Si015230m.g
I
Si033183m.g
Setaria italica
Si033183m.g
I
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
TCM_012252
Theobroma cacao
TCM_012252
I
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I