CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf026636m
(
Mimulus guttatus
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
mgf026636m
T344682_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.883
0.447
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf026636m
TCP
12
152
AGKKDRHSKICTAQGIRDRRMRLSLHVARKFFDLQDTLGYDKASQTIEWLFNQSKGAIKELAKNDDQEKSHDHVEEYSDFNISECDEEPGSGIIEENNNNNLMTPFCVVKDEIVRKPSKRELREKARARARCRTLEKMMNR
Links
Other
TCP
family TFs
Other
Mimulus guttatus
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400007467
Solanum tuberosum
PGSC0003DMG400007467
I
0.918
Solyc04g006980.1
Solanum lycopersicum
Solyc04g006980.1
I
0.914
PGSC0003DMG400000823
Solanum tuberosum
PGSC0003DMG400000823
I
0.910
Solyc05g009900.1
Solanum lycopersicum
Solyc05g009900.1
I
0.898
BRC2
Vitis vinifera
VIT_01s0011g02920
I
0.895
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.894
Ciclev10033382m.g
Citrus clementina
Ciclev10033382m.g
I
0.889
orange1.1g039323m.g
Citrus sinensis
orange1.1g039323m.g
I
0.889
TCM_011874
Theobroma cacao
TCM_011874
I
0.887
MDP0000272980
Malus domestica
MDP0000272980
I
0.887
Gorai.008G186800
Gossypium raimondii
Gorai.008G186800
I
0.886
SapurV1A.0304s0080
Salix purpurea
SapurV1A.0304s0080
I
0.884
POPTR_0010s14030
Populus trichocarpa
POPTR_0010s14030
I
0.883
Cla002355
Citrullus lanatus
Cla002355
I
0.883
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
0.883
evm.TU.supercontig_1401.1
Carica papaya
evm.TU.supercontig_1401.1
I
0.883
PK12240.1
Cannabis sativa
PK12240.1
D
0.883
BRC2
Arabidopsis thaliana
AT1G68800
I
0.882
30167.m000856
Ricinus communis
30167.m000856
I
0.876
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
0.873
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
0.873
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
0.873
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
0.873
MDP0000173048
Malus domestica
MDP0000173048
I
0.871
29738.m001041
Ricinus communis
29738.m001041
I
0.870
cassava16230.m1
Manihot esculenta
cassava16230.m1
I
0.870
PRUPE_ppa016240mg
Prunus persica
PRUPE_ppa016240mg
I
0.869
Pm029002
Prunus mume
Pm029002
I
0.869
Cucsa.031600
Cucumis sativus
Cucsa.031600
I
0.869
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
0.869
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.868
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.868
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
0.861
POPTR_0008s11470
Populus trichocarpa
POPTR_0008s11470
I
0.859
MTR_7g018500
Medicago truncatula
MTR_7g018500
I
0.858
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
0.857
chr2.LjB17A04.40.nc
Lotus japonicus
chr2.LjB17A04.40.nc
I
0.857
Cla007227
Citrullus lanatus
Cla007227
I
0.856
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
0.856
POPTR_0015s03140
Populus trichocarpa
POPTR_0015s03140
I
0.855
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
0.855
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
0.855
MTR_1g103380
Medicago truncatula
MTR_1g103380
I
0.853
Bo2g061250
Brassica oleracea
Bo2g061250
I
0.852
Bra038350
Brassica rapa
Bra038350
I
0.852
chr1.LjB10L14.10.nc
Lotus japonicus
chr1.LjB10L14.10.nc
I
0.852
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
0.851
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
0.851
GLYMA08G28691
Glycine max
GLYMA08G28691
I
0.850
Cla016709
Citrullus lanatus
Cla016709
I
0.850
GLYMA10G39141
Glycine max
GLYMA10G39141
I
0.849
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.849
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
0.849
30174.m008721
Ricinus communis
30174.m008721
I
0.848
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
0.847
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.847
Pm015499
Prunus mume
Pm015499
I
0.847
Bo2g055640
Brassica oleracea
Bo2g055640
I
0.846
GLYMA13G07475
Glycine max
GLYMA13G07475
I
0.846
GLYMA19G05921
Glycine max
GLYMA19G05921
I
0.846
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
0.846
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.845
Pm030202
Prunus mume
Pm030202
I
0.845
mgf024687m
Mimulus guttatus
mgf024687m
I
0.844
GLYMA18G51581
Glycine max
GLYMA18G51581
I
0.843
GLYMA20G28670
Glycine max
GLYMA20G28670
I
0.843
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
0.842
Thhalv10019499m.g
Eutrema salsugineum
Thhalv10019499m.g
I
0.841
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
0.840
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
0.839
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.839
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.839
Gorai.001G200400
Gossypium raimondii
Gorai.001G200400
I
0.838
Lus10021713.g
Linum usitatissimum
Lus10021713.g
I
0.838
Pavir.Ib04362
Panicum virgatum
Pavir.Ib04362
I
0.837
Bra004097
Brassica rapa
Bra004097
I
0.836
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
0.836
Bra034010
Brassica rapa
Bra034010
I
0.835
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.835
Bra004212
Brassica rapa
Bra004212
I
0.834
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.834
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.834
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.832
mgf022233m
Mimulus guttatus
mgf022233m
I
0.832
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
0.832
MDP0000224810
Malus domestica
MDP0000224810
N
0.832
Pavir.Ia00838
Panicum virgatum
Pavir.Ia00838
I
0.832
Bo6g103670
Brassica oleracea
Bo6g103670
I
0.831
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.831
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.830
Si038692m.g
Setaria italica
Si038692m.g
I
0.830
TCM_019518
Theobroma cacao
TCM_019518
I
0.830
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
0.830
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.829
MTR_6g017055
Medicago truncatula
MTR_6g017055
I
0.829
TCM_012252
Theobroma cacao
TCM_012252
I
0.829
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.829
Eucgr.J01466
Eucalyptus grandis
Eucgr.J01466
I
0.828
PGSC0003DMG400003362
Solanum tuberosum
PGSC0003DMG400003362
I
0.827
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.825
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.825
Eucgr.K02654
Eucalyptus grandis
Eucgr.K02654
I
0.824
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.823
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.823
Si033183m.g
Setaria italica
Si033183m.g
I
0.823
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
0.822