GLYMA18G51581 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA18G51581 T343900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.921 0.478
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.886 0.485
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.885 0.441
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G51581.1 TCP 96 231
GLYMA18G51581.2 TCP 96 231

Links

Other TCP family TFs
Other Glycine max TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.974
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.955
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.952
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.944
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.943
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.943
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.943
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.942
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.939
Cla016709 Citrullus lanatus Cla016709 I 0.929
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.926
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.925
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.925
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.922
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.922
PK12240.1 Cannabis sativa PK12240.1 D 0.921
29738.m001041 Ricinus communis 29738.m001041 I 0.920
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.919
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.918
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.917
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.914
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.912
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.910
BRC2 Arabidopsis thaliana AT1G68800 I 0.906
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.903
mgf019480m Mimulus guttatus mgf019480m I 0.903
Bra004212 Brassica rapa Bra004212 I 0.902
TCM_019518 Theobroma cacao TCM_019518 I 0.900
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.900
Bra004097 Brassica rapa Bra004097 I 0.899
30167.m000856 Ricinus communis 30167.m000856 I 0.899
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.898
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.898
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.898
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.897
Cla007227 Citrullus lanatus Cla007227 I 0.897
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.896
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.896
Bo6g099040 Brassica oleracea Bo6g099040 I 0.894
MDP0000173048 Malus domestica MDP0000173048 I 0.894
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.893
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.893
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.893
Bo6g103670 Brassica oleracea Bo6g103670 I 0.892
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.888
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.888
TCM_011874 Theobroma cacao TCM_011874 I 0.887
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.887
Bra034010 Brassica rapa Bra034010 I 0.886
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.886
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.886
Cla002355 Citrullus lanatus Cla002355 I 0.886
PK19717.1 Cannabis sativa PK19717.1 D 0.886
TCP1 Arabidopsis thaliana AT1G67260 D 0.885
MDP0000272980 Malus domestica MDP0000272980 I 0.885
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.883
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.882
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.881
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.881
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.879
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.879
Bo2g055640 Brassica oleracea Bo2g055640 I 0.878
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.875
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.874
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.872
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.871
Bo2g061250 Brassica oleracea Bo2g061250 I 0.869
Bra038350 Brassica rapa Bra038350 I 0.869
mgf022233m Mimulus guttatus mgf022233m I 0.869
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.866
Pm029002 Prunus mume Pm029002 I 0.866
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.866
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.863
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.857
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.845
Pm015499 Prunus mume Pm015499 I 0.845
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.845
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.845
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.844
mgf026636m Mimulus guttatus mgf026636m I 0.843
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.842
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.836
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.835
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.834
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.830
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.829
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.825