PPA16374 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA16374 T305896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.874 0.600
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.750 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA16374 Nuclear receptor 31 100

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.867
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.786
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.868
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.966
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.848
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.884
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.872
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.874
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.874
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.966
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.786
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.874
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.966
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.847
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.766
ASU_02770 Ascaris suum ASU_02770 I 0.982
ASU_03657 Ascaris suum ASU_03657 I 0.766
ASU_03870 Ascaris suum ASU_03870 I 0.750
ASU_10584 Ascaris suum ASU_10584 I 0.868
ASU_12501 Ascaris suum ASU_12501 I 0.884
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.831
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.813
Bm4980 Brugia malayi Bm4980 I 0.750
Bm5319 Brugia malayi Bm5319 I 0.869
Bm5520 Brugia malayi Bm5520 I 0.766
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.750
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.762
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.766
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.869
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.755
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.870
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.853
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.971
CBG00093 Caenorhabditis briggsae CBG00093 I 0.962
CBG01866 Caenorhabditis briggsae CBG01866 I 0.874
CBG02077 Caenorhabditis briggsae CBG02077 I 0.786
CBG03844 Caenorhabditis briggsae CBG03844 I 0.750
CBG10857 Caenorhabditis briggsae CBG10857 I 0.775
CBG16594 Caenorhabditis briggsae CBG16594 I 0.865
CBG23318 Caenorhabditis briggsae CBG23318 I 0.826
CBG23319 Caenorhabditis briggsae CBG23319 I 0.879
CBN07240 Caenorhabditis brenneri CBN07240 I 0.962
CBN18198 Caenorhabditis brenneri CBN18198 I 0.750
CBN19235 Caenorhabditis brenneri CBN19235 I 0.874
CBN20518 Caenorhabditis brenneri CBN20518 I 0.865
CBN20749 Caenorhabditis brenneri CBN20749 I 0.750
CBN21115 Caenorhabditis brenneri CBN21115 I 0.786
CBN30215 Caenorhabditis brenneri CBN30215 I 0.813
CJA00680 Caenorhabditis japonica CJA00680 I 0.775
CJA01292 Caenorhabditis japonica CJA01292 I 0.857
CJA06153 Caenorhabditis japonica CJA06153 I 0.962
CJA13458 Caenorhabditis japonica CJA13458 I 0.874
CJA37776 Caenorhabditis japonica CJA37776 I 0.777
CRE00606 Caenorhabditis remanei CRE00606 I 0.775
CRE03310 Caenorhabditis remanei CRE03310 I 0.874
CRE07549 Caenorhabditis remanei CRE07549 I 0.786
CRE08259 Caenorhabditis remanei CRE08259 I 0.750
CRE24074 Caenorhabditis remanei CRE24074 I 0.962
CRE25378 Caenorhabditis remanei CRE25378 I 0.857
CRE26981 Caenorhabditis remanei CRE26981 I 0.894
CRE26982 Caenorhabditis remanei CRE26982 I 0.824
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.838
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.868
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.786
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.966
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.767
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.816
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.766
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.766
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.885
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.982
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.852
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.856
GPLIN_000694800 Globodera pallida GPLIN_000694800 N 0.850
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.747
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.966
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.874
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.834
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.879
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.874
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.834
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.874
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.848
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.872
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.874
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.868
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.860
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.968
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.868
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.885
L596_g702 Steinernema carpocapsae L596_g702 I 0.962
L889_g1891 Steinernema feltiae L889_g1891 I 0.751
L889_g22425 Steinernema feltiae L889_g22425 N 0.954
L889_g22901 Steinernema feltiae L889_g22901 I 0.868
L889_g29879 Steinernema feltiae L889_g29879 I 0.860
L889_g7780 Steinernema feltiae L889_g7780 I 0.868
L889_g8914 Steinernema feltiae L889_g8914 I 0.983
L892_g2422 Steinernema scapterisci L892_g2422 I 0.968
L892_g5067 Steinernema scapterisci L892_g5067 I 0.962
L892_g5079 Steinernema scapterisci L892_g5079 I 0.868
L892_g8671 Steinernema scapterisci L892_g8671 I 0.868
L893_g15045 Steinernema glaseri L893_g15045 I 0.981
L893_g15276 Steinernema glaseri L893_g15276 I 0.868
L893_g22683 Steinernema glaseri L893_g22683 I 0.983
L893_g25227 Steinernema glaseri L893_g25227 I 0.885
L893_g3010 Steinernema glaseri L893_g3010 I 0.860
L898_g22454 Steinernema monticolum L898_g22454 I 0.868
L898_g2764 Steinernema monticolum L898_g2764 I 0.860
L898_g30390 Steinernema monticolum L898_g30390 I 0.966
L898_g8573 Steinernema monticolum L898_g8573 I 0.868
LOAG_00300 Loa loa LOAG_00300 I 0.869
LOAG_03407 Loa loa LOAG_03407 I 0.766
LOAG_08615 Loa loa LOAG_08615 I 0.745
LOAG_16377 Loa loa LOAG_16377 I 0.762
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.866
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.766
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.849
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.869
NECAME_00872 Necator americanus NECAME_00872 I 0.884
NECAME_01070 Necator americanus NECAME_01070 I 0.966
NECAME_01944 Necator americanus NECAME_01944 I 0.884
NECAME_06702 Necator americanus NECAME_06702 I 0.780
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.869
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.745
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.766
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.869
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.750
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.766
PEQ_0000894301 Parascaris equorum PEQ_0000894301 I 0.963
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.792
PPA20196 Pristionchus pacificus PPA20196 I 0.989
PPA24481 Pristionchus pacificus PPA24481 I 0.790
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.828
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.856
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.755
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.870
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.843
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.978
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.872
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.889
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.989
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.843
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.792
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.747
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.790
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.792
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.972
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.750
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.972
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.879
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.982
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.877
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.786
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.777
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.884
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.755
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.978
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.978
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.843
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.825
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.873
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.856
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.873
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.755
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.779
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.866
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.843
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.978
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.747
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.856
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.856
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.873
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.825
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.843
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.978
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.779
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.755
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.884
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.869
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.750
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.786
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.874
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.879
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.962
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.768
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.750
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.826
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.862
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.775
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.745
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.766
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.859
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.766