Traes_3DS_E1D759A90 (Triticum aestivum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Traes_3DS_E1D759A90 T320867_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3DS_E1D759A90.1 RWP-RK 403 451

Links

Other RWP-RK family TFs
Other Triticum aestivum TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
Bo8g050800 Brassica oleracea Bo8g050800 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bra010460 Brassica rapa Bra010460 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.000
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.000
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.000
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.000
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.000
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.000
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.000
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.000
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.000
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.000
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
mgf016974m Mimulus guttatus mgf016974m I 0.000
mgf018631m Mimulus guttatus mgf018631m I 0.000
mgf018934m Mimulus guttatus mgf018934m I 0.000
mgf022408m Mimulus guttatus mgf022408m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0014s05500 Populus trichocarpa POPTR_0014s05500 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
SapurV1A.0490s0260 Salix purpurea SapurV1A.0490s0260 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000