HMG20A (Sorex araneus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSARG00000012609 T329096_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.523 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000011396 Sox 103 171

Links

Other Sox family TFs
Other Sorex araneus TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011684 Calypte anna Aan_R011684 I 0.523
Aan_R011791 Calypte anna Aan_R011791 I 0.693
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.415
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.693
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.523
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.523
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.693
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.438
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.693
CapteG155070 Capitella teleta CapteG155070 I 0.478
CLEC002862 Cimex lectularius CLEC002862 I 0.439
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.523
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.458
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.660
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.693
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.523
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.701
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.492
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.590
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.515
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.523
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.693
HMG20A Bos taurus ENSBTAG00000020441 I 0.701
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.523
HMG20A Canis familiaris ENSCAFG00000018061 I 0.701
HMG20B Canis familiaris ENSCAFG00000019215 I 0.523
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.701
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.415
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.515
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.701
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.523
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.701
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.474
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.523
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.701
hmg20a Danio rerio ENSDARG00000031198 I 0.626
hmg20b Danio rerio ENSDARG00000042045 I 0.515
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.701
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.701
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.523
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.701
HMG20A Echinops telfairi ENSETEG00000015812 I 0.701
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.693
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.523
HMG20A Felis catus ENSFCAG00000022539 I 0.701
HMG20B Felis catus ENSFCAG00000026167 I 0.523
HMG20B Homo sapiens ENSG00000064961 I 0.523
HMG20A Homo sapiens ENSG00000140382 I 0.701
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.590
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.512
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.693
HMG20B Gallus gallus ENSGALG00000027838 I 0.523
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.701
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.523
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.512
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.590
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.627
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.469
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.523
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.701
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.476
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.619
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.523
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.701
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.523
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.693
HMG20A Microcebus murinus ENSMICG00000011025 I 0.701
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.701
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.523
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.701
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.523
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.701
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.523
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.701
Hmg20b Mus musculus ENSMUSG00000020232 D 0.523
Hmg20a Mus musculus ENSMUSG00000032329 I 0.701
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.701
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.701
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.523
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.701
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.522
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.523
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.701
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.701
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.523
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.512
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.590
HMG20A Ochotona princeps ENSOPRG00000011000 I 0.499
hmg20a Oryzias latipes ENSORLG00000001794 I 0.590
hmg20b Oryzias latipes ENSORLG00000004640 I 0.512
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.701
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.701
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.523
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.701
HMG20B Procavia capensis ENSPCAG00000010772 I 0.523
HMG20A Procavia capensis ENSPCAG00000013879 I 0.701
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.512
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.590
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.701
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.523
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.523
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.660
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.701
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.445
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.701
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.523
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.523
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.701
HMG20A Sus scrofa ENSSSCG00000001871 I 0.701
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.701
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.701
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.523
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.701
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.523
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.693
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.590
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.512
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.590
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.512
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.701
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.701
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.523
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.701
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.590
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.512
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.571
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.571
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.662
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.523
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.442
HMEL017569 Heliconius melpomene HMEL017569 I 0.438
L798_15457 Zootermopsis nevadensis L798_15457 I 0.461
LotgiG196090 Lottia gigantea LotgiG196090 I 0.485
MCINX003064 Melitaea cinxia MCINX003064 I 0.461
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.701
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.523
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.550
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.508
NV11068 Nasonia vitripennis NV11068 I 0.439
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.511
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.693
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.523
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.496
SMAR000790 Strigamia maritima SMAR000790 I 0.449
SMAR002604 Strigamia maritima SMAR002604 I 0.476
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.507
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.507
Tal_R006697 Tyto alba Tal_R006697 I 0.693
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.512
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.530
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.530
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.530
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.594
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.594
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.440
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.440