ENSSTOG00000013818 (Ictidomys tridecemlineatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSTOG00000013818 T329169_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000012385 Sox 103 171

Links

Other Sox family TFs
Other Ictidomys tridecemlineatus TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
Bo8g050800 Brassica oleracea Bo8g050800 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bra010460 Brassica rapa Bra010460 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.000
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.000
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.000
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.000
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.000
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.000
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.000
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.000
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.000
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.000
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
mgf016974m Mimulus guttatus mgf016974m I 0.000
mgf018631m Mimulus guttatus mgf018631m I 0.000
mgf018934m Mimulus guttatus mgf018934m I 0.000
mgf022408m Mimulus guttatus mgf022408m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0014s05500 Populus trichocarpa POPTR_0014s05500 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
SapurV1A.0490s0260 Salix purpurea SapurV1A.0490s0260 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000