Cucsa.193290 (Cucumis sativus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cucsa.193290 T022364_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.193290.1 B3 57 162

Links

Other B3 family TFs
Other Cucumis sativus TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.792
Bo4g197410 Brassica oleracea Bo4g197410 I 0.812
Bra040478 Brassica rapa Bra040478 I 0.822
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.802
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.703
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.822
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.842
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.842
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.822
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.861
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.832
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.782
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.713
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.792
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.822
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.832
OB02G35380 Oryza brachyantha OB02G35380 I 0.802
OBART04G22880 Oryza barthii OBART04G22880 I 0.802
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.802
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.711
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.792
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.802
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.703
OS04G0581400 Oryza sativa OS04G0581400 I 0.802
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.822
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.822
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.861
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.842
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.861
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.861
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.861
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.737
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.812
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.812
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.842
TCM_005014 Theobroma cacao TCM_005014 I 0.871
TCM_015590 Theobroma cacao TCM_015590 I 0.851
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.703
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.798
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.929
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.792
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.792
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.729
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.861
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.861
Ca_01368 Cicer arietinum Ca_01368 I 0.802
Cla006845 Citrullus lanatus Cla006845 I 0.842
Cla017937 Citrullus lanatus Cla017937 I 0.703
Pm024248 Prunus mume Pm024248 I 0.861
30068.m002615 Ricinus communis 30068.m002615 I 0.891
30076.m004471 Ricinus communis 30076.m004471 I 0.861
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.851
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.861
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.891
mgf023686m Mimulus guttatus mgf023686m I 0.743
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.832
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.743
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.714
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.842
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.703
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.703
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.842
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.703
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.792
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.851
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.931
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.861
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.871
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.871
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.861
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.703
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.782
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.871
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.842
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.861
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.802
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.911
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.792
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.851
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.703
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.792
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.871
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.861
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.851
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.832
PK04952.1 Cannabis sativa PK04952.1 I 0.713
PK11025.1 Cannabis sativa PK11025.1 I 0.822
PK21157.1 Cannabis sativa PK21157.1 I 0.871
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.832
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.851
AC216872.3_FG002 Zea mays AC216872.3_FG002 N 0.750
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.792
NGA3 Arabidopsis thaliana AT1G01030 N 0.812
NGA1 Arabidopsis thaliana AT2G46870 N 0.822
NGA2 Arabidopsis thaliana AT3G61970 N 0.842
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.703
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.792
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.822
BGIOSGA028020 Oryza indica BGIOSGA028020 N 0.708
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.812
Bo3g001110 Brassica oleracea Bo3g001110 N 0.812
Bo3g039420 Brassica oleracea Bo3g039420 N 0.792
Bo4g006900 Brassica oleracea Bo4g006900 N 0.792
Bo4g099000 Brassica oleracea Bo4g099000 N 0.772
Bo5g002790 Brassica oleracea Bo5g002790 N 0.812
Bo6g079210 Brassica oleracea Bo6g079210 N 0.802
Bo8g097490 Brassica oleracea Bo8g097490 N 0.812
Bra000434 Brassica rapa Bra000434 N 0.792
Bra003482 Brassica rapa Bra003482 N 0.832
Bra004501 Brassica rapa Bra004501 N 0.802
Bra007646 Brassica rapa Bra007646 N 0.812
Bra014415 Brassica rapa Bra014415 N 0.782
Bra030497 Brassica rapa Bra030497 N 0.802
Bra033294 Brassica rapa Bra033294 N 0.792
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.842
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.703
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.812
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.822
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.822
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.832
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.703
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.792
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.762
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.871
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.832
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.792
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.713
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.758
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.740
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.703
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.812
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.812
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.802
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.812
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.743
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.713
OB03G11610 Oryza brachyantha OB03G11610 N 0.822
OB10G24100 Oryza brachyantha OB10G24100 N 0.795
OB12G13420 Oryza brachyantha OB12G13420 N 0.713
OBART02G28100 Oryza barthii OBART02G28100 N 0.792
OBART03G01650 Oryza barthii OBART03G01650 N 0.822
OBART10G17010 Oryza barthii OBART10G17010 N 0.812
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.792
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.822
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N 0.708
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.812
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.792
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.822
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.822
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.822
ONIVA08G03420 Oryza nivara ONIVA08G03420 N 0.708
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.812
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.792
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.792
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.822
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.812
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.703
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.703
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.792
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.822
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N 0.708
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.812
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.792
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N 0.708
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.812
OS02G0683500 Oryza sativa OS02G0683500 N 0.792
OS03G0120900 Oryza sativa OS03G0120900 N 0.822
OS08G0157700 Oryza sativa OS08G0157700 N 0.708
OS10G0537100 Oryza sativa OS10G0537100 N 0.812
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.743
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.861
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.703
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.881
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.786
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.812
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.762
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.812
Si011823m.g Setaria italica Si011823m.g N 0.802
Si014362m.g Setaria italica Si014362m.g N 0.704
Si020241m.g Setaria italica Si020241m.g N 0.782
Si027632m.g Setaria italica Si027632m.g N 0.703
Si036864m.g Setaria italica Si036864m.g N 0.822
Si039972m.g Setaria italica Si039972m.g N 0.752
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.743
TCM_022729 Theobroma cacao TCM_022729 N 0.727
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.772
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.802
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.737
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.727
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.871
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.822
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.762
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.713
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.713
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.752
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.723
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.723
Cla005055 Citrullus lanatus Cla005055 N 0.941
Cla014858 Citrullus lanatus Cla014858 N 0.808
Pm028725 Prunus mume Pm028725 N 0.891
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.808
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.851
mgf019085m Mimulus guttatus mgf019085m N 0.713
mgf023769m Mimulus guttatus mgf023769m N 0.802
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.703
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.832
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.812
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.812
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.822
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.812
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.812
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.822
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.810
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.723
MDP0000128295 Malus domestica MDP0000128295 N 0.745
MDP0000138163 Malus domestica MDP0000138163 N 0.792
MDP0000229742 Malus domestica MDP0000229742 N 0.743
MDP0000288808 Malus domestica MDP0000288808 N 0.752
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.762
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.723
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.723
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.812
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.832
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.832
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.752
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.758
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.752
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.812
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.703
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.703
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.822
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.812