POPTR_0019s01020 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0019s01020 T027392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s01020.1 BED ZF 6 55

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU02819 Neurospora crassa NCU02819 D
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I
VDBG_04589 Verticillium albo atrum VDBG_04589 I
AAEL011425 Aedes aegypti AAEL011425 I
ACEP16595 Atta cephalotes ACEP16595 I
ACRE_011600 Acremonium chrysogenum ACRE_011600 I
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I
BGIBMGA005289 Bombyx mori BGIBMGA005289 I
CapteG172235 Capitella teleta CapteG172235 I
CBN25379 Caenorhabditis brenneri CBN25379 I
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I
CH063_04081 Colletotrichum higginsianum CH063_04081 I
CPIJ020011 Culex quinquefasciatus CPIJ020011 I
CPUR_04901 Claviceps purpurea CPUR_04901 I
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I
ssrp1a Danio rerio ENSDARG00000037397 I
HmgZ Drosophila melanogaster FBgn0010228 I
HmgZ Drosophila yakuba FBgn0068145 I
GA14726 Drosophila pseudoobscura FBgn0074753 I
GF11622 Drosophila ananassae FBgn0088662 I
GG20749 Drosophila erecta FBgn0112936 I
GH20784 Drosophila grimshawi FBgn0128247 I
GI20867 Drosophila mojavensis FBgn0143601 I
GL17523 Drosophila persimilis FBgn0155126 I
GM15692 Drosophila sechellia FBgn0170608 I
GD25171 Drosophila simulans FBgn0196483 I
GK15658 Drosophila willistoni FBgn0217663 I
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I
GLRG_01394 Colletotrichum graminicola GLRG_01394 I
GLYMA01G28820 Glycine max GLYMA01G28820 I
KGM_13852 Danaus plexippus KGM_13852 I
MAJ_04030 Metarhizium majus MAJ_04030 I
MANI_030028 Metarhizium anisopliae MANI_030028 I
MBR_01483 Metarhizium brunneum MBR_01483 I
MCINX001064 Melitaea cinxia MCINX001064 I
MGG_01641 Magnaporthe oryzae MGG_01641 I
MGU_02157 Metarhizium guizhouense MGU_02157 I
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I
PODANS_1_7390 Podospora anserina PODANS_1_7390 I
RPRC006380 Rhodnius prolixus RPRC006380 I
S40288_09735 Stachybotrys chartarum S40288_09735 I
SMAC_00615 Sordaria macrospora SMAC_00615 I
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I
TriadG64155 Trichoplax adhaerens TriadG64155 I
VDAG_04140 Verticillium dahliae VDAG_04140 I
VDAG_09161 Verticillium dahliae VDAG_09161 I
VDBG_04589 Verticillium alfalfae VDBG_04589 I
X797_001988 Metarhizium robertsii X797_001988 I
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I
CLEC003860 Cimex lectularius CLEC003860 I
ETH_00031100 Eimeria tenella ETH_00031100 I
PK11149.1 Cannabis sativa PK11149.1 I
XP_002159252.1 Hydra magnipapillata XP_002159252.1 I
MDOA014797 Musca domestica MDOA014797 I
PPAI002522 Phlebotomus papatasi PPAI002522 I
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I
CAOG_07557 Capsaspora owczarzaki CAOG_07557 N
CpipJ_CPIJ002952 Culex pipiens CpipJ_CPIJ002952 N
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N
WUBG_03677 Wuchereria bancrofti WUBG_03677 N
AAEL002381 Aedes aegypti AAEL002381 N
AAEL011414 Aedes aegypti AAEL011414 N
ADAC005122 Anopheles darlingi ADAC005122 N
AGAP012334 Anopheles gambiae AGAP012334 N
BGIBMGA005288 Bombyx mori BGIBMGA005288 N
BGIBMGA007393 Bombyx mori BGIBMGA007393 N
Bm2524 Brugia malayi Bm2524 N
Bm8632 Brugia malayi Bm8632 N
CBG04066 Caenorhabditis briggsae CBG04066 N
CBG09136 Caenorhabditis briggsae CBG09136 N
CJA04355 Caenorhabditis japonica CJA04355 N
CJA19030 Caenorhabditis japonica CJA19030 N
CPIJ002952 Culex quinquefasciatus CPIJ002952 N
CPIJ002953 Culex quinquefasciatus CPIJ002953 N
CRE03995 Caenorhabditis remanei CRE03995 N
CRE11852 Caenorhabditis remanei CRE11852 N
DAPPUDRAFT_201206 Daphnia pulex DAPPUDRAFT_201206 N
EHI_045480 Entamoeba histolytica EHI_045480 N
EMIHUDRAFT_49282 Emiliania huxleyi EMIHUDRAFT_49282 N
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N
HmgD Drosophila melanogaster FBgn0004362 N
Ssrp Drosophila melanogaster FBgn0010278 N
HmgD Drosophila yakuba FBgn0068146 N
Ssrp Drosophila pseudoobscura FBgn0078456 N
GF12460 Drosophila ananassae FBgn0089497 N
GF13265 Drosophila ananassae FBgn0090297 N
GG19998 Drosophila erecta FBgn0112197 N
GG22136 Drosophila erecta FBgn0114310 N
GH21124 Drosophila grimshawi FBgn0128586 N
GH21151 Drosophila grimshawi FBgn0128613 N
GI18728 Drosophila mojavensis FBgn0141467 N
GI18750 Drosophila mojavensis FBgn0141489 N
GL11071 Drosophila persimilis FBgn0148681 N
GL16947 Drosophila persimilis FBgn0154551 N
GM13209 Drosophila sechellia FBgn0168140 N
GM15859 Drosophila sechellia FBgn0170775 N
GD11622 Drosophila simulans FBgn0183362 N
GD25013 Drosophila simulans FBgn0196325 N
GJ21748 Drosophila virilis FBgn0208866 N
GJ21774 Drosophila virilis FBgn0208892 N
GK15924 Drosophila willistoni FBgn0217926 N
GK22092 Drosophila willistoni FBgn0224077 N
GE11532 Drosophila yakuba FBgn0229332 N
GA30453 Drosophila pseudoobscura FBgn0264590 N
GB54571 Apis mellifera GB54571 N
HMEL015307 Heliconius melpomene HMEL015307 N
KGM_13851 Danaus plexippus KGM_13851 N
L798_13679 Zootermopsis nevadensis L798_13679 N
LOAG_04347 Loa loa LOAG_04347 N
LOAG_08062 Loa loa LOAG_08062 N
LotgiG207546 Lottia gigantea LotgiG207546 N
ML09221a Mnemiopsis leidyi ML09221a N
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N
NV15871 Nasonia vitripennis NV15871 N
PHUM125270 Pediculus humanus PHUM125270 N
PPA02261 Pristionchus pacificus PPA02261 N
PPA06513 Pristionchus pacificus PPA06513 N
Smp_148930 Schistosoma mansoni Smp_148930 N
TC012866 Tribolium castaneum TC012866 N
hmg-1.1 Caenorhabditis elegans WBGene00001971 N
hmg-4 Caenorhabditis elegans WBGene00001974 N
WBGene00238628 Onchocerca volvulus WBGene00238628 N
WBGene00244511 Onchocerca volvulus WBGene00244511 N
YQE_02071 Dendroctonus ponderosae YQE_02071 N
EDI_049480 Entamoeba dispar EDI_049480 N
EIN_093660 Entamoeba invadens EIN_093660 N
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N
LCUP005047 Lucilia cuprina LCUP005047 N
LCUP016801 Lucilia cuprina LCUP016801 N
LDEC020995 Leptinotarsa decemlineata LDEC020995 N
PK08788.1 Cannabis sativa PK08788.1 N
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N
Minc03634 Meloidogyne incognita Minc03634 N
Minc04648 Meloidogyne incognita Minc04648 N
AALB010797 Anopheles albimanus AALB010797 N
AARA003413 Anopheles arabiensis AARA003413 N
ACHR003270 Anopheles christyi ACHR003270 N
ACOM026236 Anopheles coluzzii ACOM026236 N
ADIR000495 Anopheles dirus ADIR000495 N
AEPI002535 Anopheles epiroticus AEPI002535 N
AFUN009599 Anopheles funestus AFUN009599 N
AMAM007083 Anopheles maculatus AMAM007083 N
AMEC017787 Anopheles melas AMEC017787 N
AQUA002990 Anopheles quadriannulatus AQUA002990 N
ASIS014204 Anopheles sinensis ASIS014204 N
MDOA007633 Musca domestica MDOA007633 N
MDOA009531 Musca domestica MDOA009531 N
PPAI002521 Phlebotomus papatasi PPAI002521 N
A_01848 Schistosoma haematobium A_01848 N
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N
ASU_05994 Ascaris suum ASU_05994 N
ASU_09087 Ascaris suum ASU_09087 N
DME_0000779601 Dracunculus medinensis DME_0000779601 N
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N
HCOI01420700 Haemonchus contortus HCOI01420700 N
HCOI02106600 Haemonchus contortus HCOI02106600 N
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N
HmN_000028000 Hymenolepis microstoma HmN_000028000 N
L596_g16476 Steinernema carpocapsae L596_g16476 N
L596_g28088 Steinernema carpocapsae L596_g28088 N
L889_g16198 Steinernema feltiae L889_g16198 N
L889_g29516 Steinernema feltiae L889_g29516 N
L889_g9094 Steinernema feltiae L889_g9094 N
L892_g19058 Steinernema scapterisci L892_g19058 N
L892_g23618 Steinernema scapterisci L892_g23618 N
L893_g23503 Steinernema glaseri L893_g23503 N
L893_g29974 Steinernema glaseri L893_g29974 N
L898_g4830 Steinernema monticolum L898_g4830 N
L898_g7743 Steinernema monticolum L898_g7743 N
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N
NECAME_16525 Necator americanus NECAME_16525 N
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N
SMUV_0000358401 Syphacia muris SMUV_0000358401 N
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N
TASK_0000475801 Taenia asiatica TASK_0000475801 N
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N
TCNE_0000332201 Toxocara canis TCNE_0000332201 N
TCNE_0001025901 Toxocara canis TCNE_0001025901 N
TsM_000111500 Taenia solium TsM_000111500 N
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N