SMAC_07701 (Sordaria macrospora)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAC_07701 T129004_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU05024
M01882_2.00 		Neurospora crassa
NNNGCCTCNN
NNGAGGCNNN		 PBM
Weirauch et al.(2014)
pTH8933 		0.800 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC14902 C2H2 ZF 192 216
CCC14902 C2H2 ZF 239 271

Links

Other C2H2 ZF family TFs
Other Sordaria macrospora TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G04500 Glycine max GLYMA18G04500 I
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
Ca_13295 Cicer arietinum Ca_13295 I
MDP0000669451 Malus domestica MDP0000669451 I
GLYMA11G33720 Glycine max GLYMA11G33720 I
Pm014329 Prunus mume Pm014329 I
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
mgf025772m Mimulus guttatus mgf025772m N
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N
Carubv10018534m.g Capsella rubella Carubv10018534m.g N
Carubv10008833m.g Capsella rubella Carubv10008833m.g N
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N
cassava14484.m1 Manihot esculenta cassava14484.m1 N
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N
Lus10009133.g Linum usitatissimum Lus10009133.g N
Lus10017626.g Linum usitatissimum Lus10017626.g N
Lus10033583.g Linum usitatissimum Lus10033583.g N
MDP0000237978 Malus domestica MDP0000237978 N
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N
PK14700.1 Cannabis sativa PK14700.1 N
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N
GAI Arabidopsis thaliana AT1G14920 N
RGA Arabidopsis thaliana AT2G01570 N
Bo7g078550 Brassica oleracea Bo7g078550 N
Bo9g070200 Brassica oleracea Bo9g070200 N
Bra017443 Brassica rapa Bra017443 N
Bra024875 Brassica rapa Bra024875 N
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N
GLYMA05G27190 Glycine max GLYMA05G27190 N
GLYMA08G10140 Glycine max GLYMA08G10140 N
GRMZM2G144744 Zea mays GRMZM2G144744 N
MTR_3g065980 Medicago truncatula MTR_3g065980 N
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N
mgf008289m Mimulus guttatus mgf008289m N
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N
TCM_010965 Theobroma cacao TCM_010965 N
TCM_019165 Theobroma cacao TCM_019165 N
GAI1 Vitis vinifera VIT_01s0011g05260 N
Ca_05046 Cicer arietinum Ca_05046 N
Cla003996 Citrullus lanatus Cla003996 N
Cla020062 Citrullus lanatus Cla020062 N
Pm006304 Prunus mume Pm006304 N
28677.m000055 Ricinus communis 28677.m000055 N
29692.m000540 Ricinus communis 29692.m000540 N
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N
cassava15077.m1 Manihot esculenta cassava15077.m1 N
Cucsa.006260 Cucumis sativus Cucsa.006260 N
Cucsa.280310 Cucumis sativus Cucsa.280310 N