Pavir.Ia03450 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.Ia03450 T175397_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.809 0.809
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.809 0.809
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.789 0.789
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.781 0.781
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.781 0.781
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03450.1.p EIN3 78 335
Pavir.Ia03450.2.p EIN3 78 335

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EIL1 Arabidopsis thaliana AT2G27050 D 0.802
EIN3 Arabidopsis thaliana AT3G20770 D 0.781
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.822
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.809
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.705
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.821
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.948
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.833
Bo1g108650 Brassica oleracea Bo1g108650 I 0.785
Bo3g041690 Brassica oleracea Bo3g041690 I 0.789
Bo3g076180 Brassica oleracea Bo3g076180 I 0.761
Bo5g106280 Brassica oleracea Bo5g106280 I 0.790
Bo6g118030 Brassica oleracea Bo6g118030 I 0.703
Bra000528 Brassica rapa Bra000528 I 0.793
Bra001802 Brassica rapa Bra001802 I 0.775
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.944
F775_28545 Aegilops tauschii F775_28545 I 0.944
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.793
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.793
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.793
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.785
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.801
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.733
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.809
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.733
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.805
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.765
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.984
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.765
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.984
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.849
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.769
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.837
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.773
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.833
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.876
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.829
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.817
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.944
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.765
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.944
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.721
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.805
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.793
OBART07G26760 Oryza barthii OBART07G26760 I 0.753
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.948
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.948
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.825
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.948
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.833
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.948
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.837
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.948
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.833
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.948
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.833
OS03G0324200 Oryza sativa OS03G0324200 I 0.948
OS03G0324300 Oryza sativa OS03G0324300 I 0.948
OS07G0685700 Oryza sativa OS07G0685700 I 0.833
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.785
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.793
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.793
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.785
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.725
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.725
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.701
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.821
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.805
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.785
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.801
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.713
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.745
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.789
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.988
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.745
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.788
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.788
Si029213m.g Setaria italica Si029213m.g I 0.769
Si034616m.g Setaria italica Si034616m.g I 0.984
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.809
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.713
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.797
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.797
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.789
TCM_040510 Theobroma cacao TCM_040510 I 0.705
TCM_042022 Theobroma cacao TCM_042022 I 0.817
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.777
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.944
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.773
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.940
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.709
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.785
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.833
Ca_02669 Cicer arietinum Ca_02669 I 0.713
Ca_07534 Cicer arietinum Ca_07534 I 0.809
Ca_10236 Cicer arietinum Ca_10236 I 0.793
Pm017009 Prunus mume Pm017009 I 0.809
Pm028171 Prunus mume Pm028171 I 0.717
29708.m000185 Ricinus communis 29708.m000185 I 0.801
30169.m006395 Ricinus communis 30169.m006395 I 0.713
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.721
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.805
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.801
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.837
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.797
mgf012394m Mimulus guttatus mgf012394m I 0.773
mgf015996m Mimulus guttatus mgf015996m I 0.781
mgf018950m Mimulus guttatus mgf018950m I 0.785
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.705
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.821
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.797
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.777
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.797
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.789
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.797
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.789
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.829
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.833
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.801
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.709
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.721
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.805
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.817
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.805
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.753
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.825
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.717
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.817
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.797
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.797
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.700
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.801
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.797
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.705
MDP0000202831 Malus domestica MDP0000202831 I 0.797
MDP0000212881 Malus domestica MDP0000212881 I 0.797
MDP0000306498 Malus domestica MDP0000306498 I 0.809
MDP0000490180 Malus domestica MDP0000490180 I 0.709
MDP0000562585 Malus domestica MDP0000562585 I 0.709
MDP0000564884 Malus domestica MDP0000564884 I 0.797
MDP0000565880 Malus domestica MDP0000565880 I 0.709
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.801
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.833
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.709
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.829
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.765
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.992
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.745
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.701
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.817
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.789
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.785
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.809
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.713
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.801
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.801
PK01239.1 Cannabis sativa PK01239.1 I 0.805
PK13351.1 Cannabis sativa PK13351.1 I 0.801
PK19114.1 Cannabis sativa PK19114.1 I 0.709
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.797
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.717
TRIUR3_26675 Triticum urartu TRIUR3_26675 N 0.780