OPUNC05G23220 (Oryza punctata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OPUNC05G23220 T249584_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.838 0.672
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.838 0.672
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC05G23220.1 MADF 48 124

Links

Other MADF family TFs
Other Oryza punctata TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.838
Ca_19877 Cicer arietinum Ca_19877 I 0.853
mgf006505m Mimulus guttatus mgf006505m I 0.846
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.854
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.854
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.856
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.856
29900.m001628 Ricinus communis 29900.m001628 I 0.856
29814.m000741 Ricinus communis 29814.m000741 I 0.820
Cla019967 Citrullus lanatus Cla019967 I 0.854
Cla002288 Citrullus lanatus Cla002288 I 0.835
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.828
Ca_00394 Cicer arietinum Ca_00394 I 0.814
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.842
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.836
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.819
TCM_029695 Theobroma cacao TCM_029695 I 0.814
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.829
Si022565m.g Setaria italica Si022565m.g I 0.964
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.956
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.846
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.865
PK27986.1 Cannabis sativa PK27986.1 I 0.814
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.838
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.819
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.815
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.964
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.964
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.828
MDP0000301451 Malus domestica MDP0000301451 I 0.840
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.814
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.846
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.813
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.846
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.841
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.859
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.828
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.829
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.829
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.837
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.814
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.838
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.814
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.910
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.823
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.880
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.916
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.912
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.907
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.961
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.838
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.814
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.845
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.836
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.964
Bra003346 Brassica rapa Bra003346 I 0.839
Bo6g075950 Brassica oleracea Bo6g075950 I 0.842
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.968
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.968
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.878
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.968
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.814
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.968
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.829
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.968
OS05G0560600 Oryza sativa OS05G0560600 I 0.968
OBART05G25610 Oryza barthii OBART05G25610 I 0.968
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.968
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.968
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.869
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.922
TCM_042467 Theobroma cacao TCM_042467 N 0.860
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.938
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.930
OS01G0674000 Oryza sativa OS01G0674000 N 0.922
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.878
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.912
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.922
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.843
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.932
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.922
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.922
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.932
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.922