OPUNC01G07980 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC01G07980 T276408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.754 0.799
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.754 0.799
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.749 0.827
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.730 0.835
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.702 0.770
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC01G07980.1 Myb 51 97
OPUNC01G07980.1 Myb 103 149
OPUNC01G07980.1 Myb 155 199
OPUNC01G07980.2 Myb 51 92
OPUNC01G07980.2 Myb 98 144
OPUNC01G07980.2 Myb 150 194

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.754
MYB3R4 Arabidopsis thaliana AT5G11510 D 0.702
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.749
PK12011.1 Cannabis sativa PK12011.1 D 0.730
AMTR_s00009p00263240 Amborella trichopoda AMTR_s00009p00263240 I 0.717
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.661
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.691
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.666
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.708
Bo1g010040 Brassica oleracea Bo1g010040 I 0.723
Bo3g007070 Brassica oleracea Bo3g007070 I 0.708
Bo3g171130 Brassica oleracea Bo3g171130 I 0.748
Bo3g179620 Brassica oleracea Bo3g179620 I 0.708
Bo7g115810 Brassica oleracea Bo7g115810 I 0.751
Bo9g171130 Brassica oleracea Bo9g171130 I 0.702
Bra006102 Brassica rapa Bra006102 I 0.706
Bra008956 Brassica rapa Bra008956 I 0.702
Bra011376 Brassica rapa Bra011376 I 0.723
Bra034531 Brassica rapa Bra034531 I 0.748
Bra037045 Brassica rapa Bra037045 I 0.722
BRADI2G31887 Brachypodium distachyon BRADI2G31887 I 0.771
F775_05724 Aegilops tauschii F775_05724 I 0.863
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.666
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I 0.702
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.754
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.743
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.743
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.714
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.721
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.756
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.788
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.667
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.846
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.735
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.741
OB01G18340 Oryza brachyantha OB01G18340 I 0.890
OB01G45570 Oryza brachyantha OB01G45570 I 0.669
OB12G16480 Oryza brachyantha OB12G16480 I 0.886
OBART01G08110 Oryza barthii OBART01G08110 I 0.901
OBART05G19200 Oryza barthii OBART05G19200 I 0.708
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.901
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.699
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.901
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.859
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.901
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.708
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.909
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.701
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.870
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.699
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.715
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.886
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.708
MYB3R-2 Oryza sativa OS01G0841500 I 0.699
OS05G0459000 Oryza sativa OS05G0459000 I 0.715
OS12G0238000 Oryza sativa OS12G0238000 I 0.880
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.691
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.748
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.748
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.784
PRUPE_ppa022218mg Prunus persica PRUPE_ppa022218mg I 0.683
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.671
Si000842m.g Setaria italica Si000842m.g I 0.697
Si021484m.g Setaria italica Si021484m.g I 0.704
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.750
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.667
TCM_047091 Theobroma cacao TCM_047091 I 0.731
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.779
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.685
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.776
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.682
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.667
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.893
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.893
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.667
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.667
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.864
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.691
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.709
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.663
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.742
Ca_01884 Cicer arietinum Ca_01884 I 0.702
Ca_14925 Cicer arietinum Ca_14925 I 0.740
Cla022565 Citrullus lanatus Cla022565 I 0.750
Cla023357 Citrullus lanatus Cla023357 I 0.748
Pm005124 Prunus mume Pm005124 I 0.764
Pm018007 Prunus mume Pm018007 I 0.683
29794.m003447 Ricinus communis 29794.m003447 I 0.744
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.750
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.666
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.748
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.679
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.685
mgf006384m Mimulus guttatus mgf006384m I 0.677
mgf008601m Mimulus guttatus mgf008601m I 0.747
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.753
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.686
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I 0.702
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.672
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.754
Cagra.4093s0003 Capsella grandiflora Cagra.4093s0003 I 0.698
Cagra.7526s0003 Capsella grandiflora Cagra.7526s0003 I 0.686
Carubv10000155m.g Capsella rubella Carubv10000155m.g I 0.686
Carubv10004063m.g Capsella rubella Carubv10004063m.g I 0.698
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.759
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.683
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.750
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.764
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.766
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.677
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.712
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.678
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.728
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.728
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.786
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.687
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.687
MDP0000179225 Malus domestica MDP0000179225 I 0.774
MDP0000295807 Malus domestica MDP0000295807 I 0.781
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.683
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.880
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.697
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.880
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.697
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.803
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.689
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.750
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.718
Thhalv10012583m.g Eutrema salsugineum Thhalv10012583m.g I 0.696
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.716
PK22174.1 Cannabis sativa PK22174.1 I 0.710
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.761
PDK_20s1371143g001 Phoenix dactylifera PDK_20s1371143g001 I 0.694
BRADI2G07677 Brachypodium distachyon BRADI2G07677 N 0.719
OB05G26770 Oryza brachyantha OB05G26770 N 0.695
OPUNC12G06560 Oryza punctata OPUNC12G06560 N 0.761
ORUFI01G08920 Oryza rufipogon ORUFI01G08920 N 0.675
Sb09g007370 Sorghum bicolor Sb09g007370 N 0.735
Gorai.008G117400 Gossypium raimondii Gorai.008G117400 N 0.666