scaffold113-EXSNAP2012.49 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold113-EXSNAP2012.49 T336894_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold113-EXSNAP2012.49 Sox 18 82

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.419
AAEL011425 Aedes aegypti AAEL011425 I 0.446
CapteG172235 Capitella teleta CapteG172235 I 0.444
CBN25379 Caenorhabditis brenneri CBN25379 I 0.518
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.419
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.415
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.422
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.422
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.420
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.486
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.434
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.418
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.417
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.530
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.549
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.549
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.549
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.549
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.549
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.632
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.625
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.487
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.461
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.461
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.498
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.446
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.446
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.419
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.416
ACEP16621 Atta cephalotes ACEP16621 N 0.424
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.441
Bm6643 Brugia malayi Bm6643 N 0.480
Bm8632 Brugia malayi Bm8632 N 0.625
CBG04066 Caenorhabditis briggsae CBG04066 N 0.460
CBG09136 Caenorhabditis briggsae CBG09136 N 0.484
CBG20663 Caenorhabditis briggsae CBG20663 N 0.529
CBN04053 Caenorhabditis brenneri CBN04053 N 0.478
CJA04355 Caenorhabditis japonica CJA04355 N 0.709
CJA19030 Caenorhabditis japonica CJA19030 N 0.415
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.419
CRE03995 Caenorhabditis remanei CRE03995 N 0.460
CRE11852 Caenorhabditis remanei CRE11852 N 0.688
Ssrp Drosophila melanogaster FBgn0010278 N 0.457
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.490
GF12460 Drosophila ananassae FBgn0089497 N 0.457
GG19998 Drosophila erecta FBgn0112197 N 0.457
GH21151 Drosophila grimshawi FBgn0128613 N 0.450
GI18750 Drosophila mojavensis FBgn0141489 N 0.481
GL11071 Drosophila persimilis FBgn0148681 N 0.490
GD25013 Drosophila simulans FBgn0196325 N 0.457
GJ21774 Drosophila virilis FBgn0208892 N 0.457
GK22092 Drosophila willistoni FBgn0224077 N 0.485
GE11532 Drosophila yakuba FBgn0229332 N 0.457
GB47837 Apis mellifera GB47837 N 0.465
HMEL015307 Heliconius melpomene HMEL015307 N 0.441
KGM_13851 Danaus plexippus KGM_13851 N 0.422
LOAG_08062 Loa loa LOAG_08062 N 0.625
LOAG_14354 Loa loa LOAG_14354 N 0.416
PPA02261 Pristionchus pacificus PPA02261 N 0.523
PPA06513 Pristionchus pacificus PPA06513 N 0.556
PPA14042 Pristionchus pacificus PPA14042 N 0.498
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.741
SINV22588 Solenopsis invicta SINV22588 N 0.465
SMAR015352 Strigamia maritima SMAR015352 N 0.421
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.547
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.697
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.490
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.416
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.625
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.419
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.465
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.465
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.453
Minc01744 Meloidogyne incognita Minc01744 N 0.425
Minc03634 Meloidogyne incognita Minc03634 N 0.502
Minc04648 Meloidogyne incognita Minc04648 N 0.502
Minc10016 Meloidogyne incognita Minc10016 N 0.425
MDOA007633 Musca domestica MDOA007633 N 0.457
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.425
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.656
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.463
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.662
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.463
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.679
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.463
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.518
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.486
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.493
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.486
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.656
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.486
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.529
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.486
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.656
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.505
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.463
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.604
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.705
ASU_05752 Ascaris suum ASU_05752 N 0.463
ASU_05994 Ascaris suum ASU_05994 N 0.693
ASU_07820 Ascaris suum ASU_07820 N 0.518
ASU_09087 Ascaris suum ASU_09087 N 0.679
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.416
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.473
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.662
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.424
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.693
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.429
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.416
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.429
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.617
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.456
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.424
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.486
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.498
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.656
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.498
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.426
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.453
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.480
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.486
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.656
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.665
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.693
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.476
L889_g16198 Steinernema feltiae L889_g16198 N 0.641
L889_g27280 Steinernema feltiae L889_g27280 N 0.452
L889_g29516 Steinernema feltiae L889_g29516 N 0.522
L889_g30211 Steinernema feltiae L889_g30211 N 0.447
L889_g6592 Steinernema feltiae L889_g6592 N 0.554
L889_g9094 Steinernema feltiae L889_g9094 N 0.693
L892_g19058 Steinernema scapterisci L892_g19058 N 0.693
L892_g23618 Steinernema scapterisci L892_g23618 N 0.665
L892_g2503 Steinernema scapterisci L892_g2503 N 0.476
L893_g23503 Steinernema glaseri L893_g23503 N 0.630
L893_g29974 Steinernema glaseri L893_g29974 N 0.693
L898_g23313 Steinernema monticolum L898_g23313 N 0.438
L898_g4830 Steinernema monticolum L898_g4830 N 0.693
L898_g7743 Steinernema monticolum L898_g7743 N 0.630
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.502
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.419
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.419
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.502
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.625
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.529
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.486
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.656
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.480
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.625
NECAME_10840 Necator americanus NECAME_10840 N 0.486
NECAME_16525 Necator americanus NECAME_16525 N 0.529
NECAME_17555 Necator americanus NECAME_17555 N 0.662
NECAME_17981 Necator americanus NECAME_17981 N 0.662
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.467
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.625
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.416
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.625
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.656
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.416
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.502
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.619
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.627
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.547
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.521
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.495
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.603
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.552
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.741
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.523
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.556
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.645
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.662
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.619
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.490
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.619
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.484
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.662
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.662
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.490
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.619
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.473
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.529
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.429
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.673
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.486
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.693
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.656
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.486
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.486
TsM_000111500 Taenia solium TsM_000111500 N 0.429
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.429