PGSC0003DMG400003362 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400003362 T344251_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.872 0.532
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400008673 TCP 68 149

Links

Other TCP family TFs
Other Solanum tuberosum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK12240.1 Cannabis sativa PK12240.1 D 0.872
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.880
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.861
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.833
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.834
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.830
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.823
mgf019480m Mimulus guttatus mgf019480m I 0.895
mgf022233m Mimulus guttatus mgf022233m I 0.908
mgf026636m Mimulus guttatus mgf026636m I 0.827
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.862
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.862
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.862
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.862
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.855
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.864
30167.m000856 Ricinus communis 30167.m000856 I 0.848
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.825
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.834
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.850
MDP0000173048 Malus domestica MDP0000173048 I 0.849
MDP0000272980 Malus domestica MDP0000272980 I 0.830
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.862
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.867
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.836
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.848
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.861
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.843
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.823
29738.m001041 Ricinus communis 29738.m001041 I 0.855
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.878
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.831
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.847
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.835
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.866
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.823
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.827
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.837
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.865
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.847
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.826
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.869
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.848
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.857
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.824
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.878
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.825
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.845
Si033183m.g Setaria italica Si033183m.g I 0.861
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.952
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.868
TCM_011874 Theobroma cacao TCM_011874 I 0.843
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.851
Cla002355 Citrullus lanatus Cla002355 I 0.831
Cla016709 Citrullus lanatus Cla016709 I 0.853
Pm029002 Prunus mume Pm029002 I 0.825
BRC2 Arabidopsis thaliana AT1G68800 I 0.878
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.825