ORUFI03G40640 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI03G40640 T004015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.842 0.929
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.834 0.939
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.817 0.909
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.798 0.838
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI03G40640.1 AP2 117 167
ORUFI03G40640.1 AP2 209 260
ORUFI03G40640.2 AP2 117 148
ORUFI03G40640.2 AP2 190 241

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28752.m000339 Ricinus communis 28752.m000339 I 0.837
29169.m000017 Ricinus communis 29169.m000017 I 0.830
29805.m001494 Ricinus communis 29805.m001494 I 0.843
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.836
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.823
AP2 Arabidopsis thaliana AT4G36920 I 0.842
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.842
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.851
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.849
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.836
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.865
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.839
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.836
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.819
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.857
Bo1g004960 Brassica oleracea Bo1g004960 I 0.842
Bo4g070350 Brassica oleracea Bo4g070350 I 0.830
Bo7g064000 Brassica oleracea Bo7g064000 I 0.800
Bo7g118400 Brassica oleracea Bo7g118400 I 0.842
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.790
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.842
Bra011741 Brassica rapa Bra011741 I 0.842
Bra011939 Brassica rapa Bra011939 I 0.830
Bra012139 Brassica rapa Bra012139 I 0.800
Bra017809 Brassica rapa Bra017809 I 0.842
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.792
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.855
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.834
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.838
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.790
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.834
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.842
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.842
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.834
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.790
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.830
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.836
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.795
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.827
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.836
Ca_02499 Cicer arietinum Ca_02499 I 0.838
Ca_09295 Cicer arietinum Ca_09295 I 0.842
Ca_12010 Cicer arietinum Ca_12010 I 0.816
Ca_14618 Cicer arietinum Ca_14618 I 0.842
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.827
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.836
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.767
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.810
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.831
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.806
Cla000716 Citrullus lanatus Cla000716 I 0.841
Cla018124 Citrullus lanatus Cla018124 I 0.835
Cla018549 Citrullus lanatus Cla018549 I 0.778
Cla020549 Citrullus lanatus Cla020549 I 0.788
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.819
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.783
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.841
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.835
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.833
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.830
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.824
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.838
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.814
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.795
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.841
F775_32962 Aegilops tauschii F775_32962 I 0.834
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.788
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.824
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.778
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.841
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.833
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.841
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.836
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.836
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.838
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.810
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.841
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.811
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.835
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.841
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.834
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.844
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.846
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.819
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.821
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.798
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.839
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.853
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.802
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.831
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.855
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.835
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.816
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.844
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.841
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.842
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.831
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.843
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.805
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.836
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.843
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.846
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.829
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.840
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.794
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.837
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.823
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.845
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.842
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.842
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.835
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.772
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.823
LPERR07G06910 Leersia perrieri LPERR07G06910 N 0.739
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.803
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.831
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.808
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.808
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.831
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.812
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.833
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.812
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.775
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.794
MDP0000137561 Malus domestica MDP0000137561 I 0.825
MDP0000163645 Malus domestica MDP0000163645 I 0.797
MDP0000181606 Malus domestica MDP0000181606 I 0.831
MDP0000200319 Malus domestica MDP0000200319 I 0.836
mgf005133m Mimulus guttatus mgf005133m I 0.822
mgf009315m Mimulus guttatus mgf009315m I 0.840
mgf010466m Mimulus guttatus mgf010466m I 0.822
mgf021945m Mimulus guttatus mgf021945m I 0.831
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.790
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.858
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.835
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.833
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.842
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.841
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.816
OB03G45870 Oryza brachyantha OB03G45870 I 0.857
OB06G29960 Oryza brachyantha OB06G29960 I 0.819
OBART03G38950 Oryza barthii OBART03G38950 N 0.747
OBART07G08110 Oryza barthii OBART07G08110 I 0.857
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.865
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.839
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.819
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.857
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.857
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.772
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.865
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.839
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.819
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.857
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.857
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.865
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.839
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.819
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.865
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.839
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.836
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.821
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.857
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.810
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.836
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.806
ORGLA03G0357200 Oryza glaberrima ORGLA03G0357200 N 0.712
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.839
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.836
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.857
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.839
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.819
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.857
OS03G0818800 Oryza sativa OS03G0818800 I 0.804
OS05G0121600 Oryza sativa OS05G0121600 I 0.836
OS07G0235800 Oryza sativa OS07G0235800 I 0.857
P93632_MAIZE Zea mays P93632_MAIZE D 0.798
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.853
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.789
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.836
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.836
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.855
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.805
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.832
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.855
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.836
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.841
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.840
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.819
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.836
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.832
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.837
PK02403.1 Cannabis sativa PK02403.1 I 0.841
PK07183.1 Cannabis sativa PK07183.1 I 0.835
PK14490.1 Cannabis sativa PK14490.1 I 0.689
Pm000974 Prunus mume Pm000974 I 0.831
Pm002492 Prunus mume Pm002492 I 0.835
Pm030172 Prunus mume Pm030172 I 0.824
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.839
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.831
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.841
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.808
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.690
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.835
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.824
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.835
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.817
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.842
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.834
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.836
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.811
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.830
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.835
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.841
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.852
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.855
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.853
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.839
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.796
Si006371m.g Setaria italica Si006371m.g I 0.686
Si012635m.g Setaria italica Si012635m.g I 0.839
Si025305m.g Setaria italica Si025305m.g I 0.836
Si029636m.g Setaria italica Si029636m.g I 0.853
Si036068m.g Setaria italica Si036068m.g I 0.855
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.836
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.841
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.841
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.811
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.835
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
TCM_000665 Theobroma cacao TCM_000665 I 0.844
TCM_022077 Theobroma cacao TCM_022077 I 0.835
TCM_042000 Theobroma cacao TCM_042000 I 0.834
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.800
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.834
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.697
TOE3 Arabidopsis thaliana AT5G67180 I 0.790
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.790
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.841
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.834
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.834
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.834
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.709
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.835
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.847