Gorai.007G359400 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.007G359400 T008602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.799 0.940
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.768 0.900
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.683 0.780
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.679 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G359400.1 AP2 28 79

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000639 Ricinus communis 27810.m000639 I 0.809
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.795
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.704
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.799
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.677
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.805
Bo4g111040 Brassica oleracea Bo4g111040 I 0.749
Bo6g073020 Brassica oleracea Bo6g073020 I 0.766
Bo6g086320 Brassica oleracea Bo6g086320 I 0.679
Bo8g092010 Brassica oleracea Bo8g092010 I 0.765
Bo9g155940 Brassica oleracea Bo9g155940 I 0.679
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.768
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.679
Bra002159 Brassica rapa Bra002159 I 0.679
Bra003752 Brassica rapa Bra003752 I 0.679
Bra007341 Brassica rapa Bra007341 I 0.765
Bra014617 Brassica rapa Bra014617 I 0.749
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.805
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.768
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.768
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.809
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.809
Ca_07264 Cicer arietinum Ca_07264 I 0.809
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.769
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.818
Cla017778 Citrullus lanatus Cla017778 I 0.775
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.767
DREB2A Oryza sativa OS01G0165000 I 0.677
DREB2E Oryza sativa OS03G0174400 I 0.805
DREB2F Arabidopsis thaliana AT3G57600 D 0.768
DREB2G Arabidopsis thaliana AT5G18450 D 0.679
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.795
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.686
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.810
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.748
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.739
F775_05774 Aegilops tauschii F775_05774 I 0.683
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.768
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.687
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.809
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.805
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.809
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.805
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.805
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.765
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.809
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.786
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.805
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.805
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.678
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.682
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.689
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.686
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.813
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.801
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.801
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.686
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.692
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.692
MDP0000250927 Malus domestica MDP0000250927 I 0.677
MDP0000703626 Malus domestica MDP0000703626 I 0.817
MDP0000871361 Malus domestica MDP0000871361 I 0.817
mgf017629m Mimulus guttatus mgf017629m I 0.706
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.683
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.809
OB01G13930 Oryza brachyantha OB01G13930 I 0.677
OBART01G04210 Oryza barthii OBART01G04210 I 0.677
OBART03G05550 Oryza barthii OBART03G05550 I 0.805
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.677
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.805
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.677
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.677
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.805
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.677
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.805
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.677
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.805
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.818
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.677
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.677
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.805
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.805
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.805
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.809
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.688
PK08602.1 Cannabis sativa PK08602.1 D 0.799
Pm003634 Prunus mume Pm003634 I 0.681
Pm025865 Prunus mume Pm025865 I 0.817
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.792
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.809
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.817
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.681
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.683
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.809
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.787
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.689
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.689
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.679
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.768
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.713
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.713
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.768
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.756
TCM_024756 Theobroma cacao TCM_024756 I 0.818
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.756
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.679
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.683
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.683
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.795
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.683
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.809