GSMUA_Achr2G13410_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr2G13410_001 T118683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.782 0.804
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.782 0.804
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.776 0.783
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.773 0.783
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.773 0.783
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.773 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.771 0.783
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.760 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.760 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P13410_001 C2H2 ZF 88 110
GSMUA_Achr2P13410_001 C2H2 ZF 145 167

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28152.m000908 Ricinus communis 28152.m000908 I 0.780
29661.m000908 Ricinus communis 29661.m000908 I 0.756
30170.m013751 Ricinus communis 30170.m013751 I 0.773
AC211702.2_FG002 Zea mays AC211702.2_FG002 I 0.780
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.803
AZF1 Arabidopsis thaliana AT5G67450 D 0.782
AZF2 Arabidopsis thaliana AT3G19580 D 0.771
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.776
AZF3 Arabidopsis thaliana AT5G43170 I 0.777
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.777
Bo1g081350 Brassica oleracea Bo1g081350 I 0.788
Bo1g113530 Brassica oleracea Bo1g113530 I 0.776
Bo2g161550 Brassica oleracea Bo2g161550 N 0.773
Bo2g168030 Brassica oleracea Bo2g168030 I 0.782
Bo3g037560 Brassica oleracea Bo3g037560 I 0.784
Bo3g142840 Brassica oleracea Bo3g142840 I 0.773
Bo4g195370 Brassica oleracea Bo4g195370 I 0.784
Bo5g113850 Brassica oleracea Bo5g113850 I 0.776
Bo7g048650 Brassica oleracea Bo7g048650 I 0.778
Bo7g065200 Brassica oleracea Bo7g065200 I 0.771
Bo9g019120 Brassica oleracea Bo9g019120 I 0.782
Bo9g181170 Brassica oleracea Bo9g181170 I 0.776
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.760
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.778
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.776
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.776
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.760
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.785
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.776
Bra000372 Brassica rapa Bra000372 I 0.784
Bra009464 Brassica rapa Bra009464 I 0.776
Bra010922 Brassica rapa Bra010922 I 0.773
Bra012914 Brassica rapa Bra012914 I 0.788
Bra018817 Brassica rapa Bra018817 I 0.780
Bra022436 Brassica rapa Bra022436 I 0.776
Bra029315 Brassica rapa Bra029315 N 0.773
Bra029985 Brassica rapa Bra029985 I 0.788
Bra031834 Brassica rapa Bra031834 I 0.782
Bra033666 Brassica rapa Bra033666 I 0.771
Bra037845 Brassica rapa Bra037845 I 0.782
Bra038219 Brassica rapa Bra038219 I 0.776
Bra040325 Brassica rapa Bra040325 I 0.784
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.758
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I 0.765
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I 0.763
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.776
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.760
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.760
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.776
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.771
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.771
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.776
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.760
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.760
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.780
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.780
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.776
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.780
Ca_01586 Cicer arietinum Ca_01586 I 0.776
Ca_18364 Cicer arietinum Ca_18364 I 0.776
Ca_23672 Cicer arietinum Ca_23672 I 0.766
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.800
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.800
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.776
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.776
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.776
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.766
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.776
Cla001400 Citrullus lanatus Cla001400 I 0.756
Cla022966 Citrullus lanatus Cla022966 I 0.785
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.780
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.800
Cucsa.395710 Cucumis sativus Cucsa.395710 I 0.785
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.776
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.766
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.782
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.756
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.760
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.776
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.766
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.766
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.766
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.776
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.776
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.776
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.776
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.766
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.786
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.767
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.776
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.776
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.786
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.776
GRMZM2G455889 Zea mays GRMZM2G455889 I 0.801
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.768
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.768
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.760
MDP0000198015 Malus domestica MDP0000198015 I 0.776
MDP0000319225 Malus domestica MDP0000319225 I 0.776
MDP0000573176 Malus domestica MDP0000573176 I 0.776
MDP0000762756 Malus domestica MDP0000762756 I 0.776
mgf006006m Mimulus guttatus mgf006006m I 0.773
mgf021789m Mimulus guttatus mgf021789m I 0.768
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.768
MLOC_70662 Hordeum vulgare MLOC_70662 I 0.771
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.766
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.775
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.776
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.776
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.760
OB03G42170 Oryza brachyantha OB03G42170 I 0.786
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.776
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.776
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.766
Pavir.J15304 Panicum virgatum Pavir.J15304 N 0.773
Pavir.J16973 Panicum virgatum Pavir.J16973 N 0.773
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.771
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.786
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.766
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.786
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.780
PGSC0003DMG400045547 Solanum tuberosum PGSC0003DMG400045547 I 0.761
PK10188.1 Cannabis sativa PK10188.1 I 0.776
Pm005390 Prunus mume Pm005390 I 0.776
Pm021284 Prunus mume Pm021284 I 0.776
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.775
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.760
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.771
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.776
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.776
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.776
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.771
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.771
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.760
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.760
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.776
Sb02g038000 Sorghum bicolor Sb02g038000 N 0.773
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.760
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.766
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.756
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.782
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.773
TCM_000780 Theobroma cacao TCM_000780 I 0.773
TCM_007214 Theobroma cacao TCM_007214 I 0.776
TCM_034720 Theobroma cacao TCM_034720 I 0.776
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.784
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.788
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.776
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.776
Traes_2BS_DD07C2EE6 Triticum aestivum Traes_2BS_DD07C2EE6 N 0.773
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.758
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.770
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.778
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.766
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.776
ZAT10 Arabidopsis thaliana AT1G27730 D 0.773
ZAT4 Arabidopsis thaliana AT2G45120 D 0.760
ZAT6 Arabidopsis thaliana AT5G04340 D 0.776
ZAT9 Arabidopsis thaliana AT3G60580 D 0.760