SVE_0268000 (Strongyloides venezuelensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVE_0268000 T310639_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.881 0.500
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.760 0.486
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.760 0.486
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.760 0.486
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.760 0.486
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.760 0.486
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.753 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0268000.2 Nuclear receptor 11 80

Links

Other Nuclear receptor family TFs
Other Strongyloides venezuelensis TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009393 Calypte anna Aan_R009393 I 0.760
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.842
ACAC_0000851101 Angiostrongylus cantonensis ACAC_0000851101 I 0.801
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.781
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.837
Afo_R013752 Aptenodytes forsteri Afo_R013752 I 0.760
ALUE_0000465801 Ascaris lumbricoides ALUE_0000465801 I 0.774
ANCCAN_06314 Ancylostoma caninum ANCCAN_06314 I 0.801
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.753
ANCCEY_08759 Ancylostoma ceylanicum ANCCEY_08759 I 0.801
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.801
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.785
ASU_03657 Ascaris suum ASU_03657 I 0.767
ASU_03870 Ascaris suum ASU_03870 I 0.881
ASU_08381 Ascaris suum ASU_08381 I 0.774
ASU_10584 Ascaris suum ASU_10584 I 0.819
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.831
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.792
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.792
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.814
Bm4429 Brugia malayi Bm4429 I 0.764
Bm4980 Brugia malayi Bm4980 I 0.884
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.884
BTMF_0001121901 Brugia timori BTMF_0001121901 I 0.764
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.852
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.810
BXY_0810300 Bursaphelenchus xylophilus BXY_0810300 I 0.763
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.900
B_00901 Schistosoma haematobium B_00901 I 0.767
CBG01866 Caenorhabditis briggsae CBG01866 I 0.753
CBG03844 Caenorhabditis briggsae CBG03844 I 0.881
CBG09380 Caenorhabditis briggsae CBG09380 I 0.804
CBG10855 Caenorhabditis briggsae CBG10855 I 0.771
CBG10857 Caenorhabditis briggsae CBG10857 I 0.794
CBN15481 Caenorhabditis brenneri CBN15481 I 0.861
CBN18198 Caenorhabditis brenneri CBN18198 I 0.881
CBN19235 Caenorhabditis brenneri CBN19235 I 0.753
CBN20749 Caenorhabditis brenneri CBN20749 I 0.881
CBN24827 Caenorhabditis brenneri CBN24827 I 0.772
CBN28528 Caenorhabditis brenneri CBN28528 I 0.861
CJA00680 Caenorhabditis japonica CJA00680 I 0.841
CJA08896 Caenorhabditis japonica CJA08896 I 0.771
CJA13458 Caenorhabditis japonica CJA13458 I 0.753
Cmyd_10020219 Chelonia mydas Cmyd_10020219 I 0.760
CRE00149 Caenorhabditis remanei CRE00149 I 0.771
CRE00606 Caenorhabditis remanei CRE00606 I 0.794
CRE03310 Caenorhabditis remanei CRE03310 I 0.753
CRE08259 Caenorhabditis remanei CRE08259 I 0.881
CRE30787 Caenorhabditis remanei CRE30787 I 0.861
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.842
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.804
DICVIV_09685 Dictyocaulus viviparus DICVIV_09685 I 0.801
DME_0000359001 Dracunculus medinensis DME_0000359001 I 0.764
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.894
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.786
ECANG7_07248 Echinococcus canadensis ECANG7_07248 I 0.807
EmuJ_000088800 Echinococcus multilocularis EmuJ_000088800 I 0.807
ENSAMEG00000011212 Ailuropoda melanoleuca ENSAMEG00000011212 I 0.760
ENSAPLG00000004548 Anas platyrhynchos ENSAPLG00000004548 I 0.760
ENSBTAP00000051129-D1 Bos grunniens ENSBTAP00000051129-D1 I 0.760
ENSCSAVG00000002688 Ciona savignyi ENSCSAVG00000002688 I 0.795
ENSFALG00000002133 Ficedula albicollis ENSFALG00000002133 I 0.760
ENSGMOG00000008794 Gadus morhua ENSGMOG00000008794 I 0.760
ENSLACG00000018630 Latimeria chalumnae ENSLACG00000018630 I 0.760
ENSLOCG00000005138 Lepisosteus oculatus ENSLOCG00000005138 I 0.760
ENSMEUG00000013509 Macropus eugenii ENSMEUG00000013509 I 0.760
ENSMPUG00000013965 Mustela putorius furo ENSMPUG00000013965 I 0.760
ENSNLEG00000017287 Nomascus leucogenys ENSNLEG00000017287 I 0.760
ENSOARG00000013368 Ovis aries ENSOARG00000013368 I 0.760
ENSONIG00000020217 Oreochromis niloticus ENSONIG00000020217 I 0.760
ENSORLG00000016492 Oryzias latipes ENSORLG00000016492 I 0.760
ENSP00000420267 Macaca fascicularis ENSP00000420267 I 0.760
ENSPANG00000025861 Papio anubis ENSPANG00000025861 I 0.760
ENSPFOG00000005783 Poecilia formosa ENSPFOG00000005783 I 0.760
ENSPPYG00000019600 Pongo abelii ENSPPYG00000019600 I 0.760
ENSPSIG00000006445 Pelodiscus sinensis ENSPSIG00000006445 I 0.760
ENSSHAG00000016733 Sarcophilus harrisii ENSSHAG00000016733 I 0.760
ENSSSCG00000023876 Sus scrofa ENSSSCG00000023876 I 0.760
ENSSTOG00000022764 Ictidomys tridecemlineatus ENSSTOG00000022764 I 0.760
ENSTSYG00000004262 Tarsius syrichta ENSTSYG00000004262 I 0.760
ENSXMAG00000009061 Xiphophorus maculatus ENSXMAG00000009061 I 0.760
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.773
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.804
gcnf Ciona intestinalis ENSCING00000005163 I 0.795
Gfo_R007909 Geospiza fortis Gfo_R007909 I 0.760
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.814
GPLIN_001122300 Globodera pallida GPLIN_001122300 I 0.774
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.882
Hba_20244 Heterorhabditis bacteriophora Hba_20244 I 0.746
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.842
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.822
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.808
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.753
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.822
HCOI01788400 Haemonchus contortus HCOI01788400 I 0.801
HmN_000254900 Hymenolepis microstoma HmN_000254900 I 0.807
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.753
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.837
HPLM_0000431601 Haemonchus placei HPLM_0000431601 I 0.801
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.806
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.844
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.748
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.819
L596_g23334 Steinernema carpocapsae L596_g23334 I 0.756
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.800
L889_g1557 Steinernema feltiae L889_g1557 I 0.853
L889_g17247 Steinernema feltiae L889_g17247 I 0.868
L889_g1891 Steinernema feltiae L889_g1891 I 0.786
L889_g22901 Steinernema feltiae L889_g22901 I 0.819
L889_g28055 Steinernema feltiae L889_g28055 I 0.756
L889_g29879 Steinernema feltiae L889_g29879 I 0.748
L892_g17164 Steinernema scapterisci L892_g17164 I 0.756
L892_g17612 Steinernema scapterisci L892_g17612 I 0.764
L892_g4169 Steinernema scapterisci L892_g4169 I 0.800
L892_g5079 Steinernema scapterisci L892_g5079 I 0.819
L893_g13285 Steinernema glaseri L893_g13285 I 0.845
L893_g15276 Steinernema glaseri L893_g15276 I 0.819
L893_g28857 Steinernema glaseri L893_g28857 I 0.848
L893_g3010 Steinernema glaseri L893_g3010 I 0.748
L893_g33993 Steinernema glaseri L893_g33993 I 0.756
L893_g3565 Steinernema glaseri L893_g3565 I 0.770
L898_g26357 Steinernema monticolum L898_g26357 I 0.868
L898_g2764 Steinernema monticolum L898_g2764 I 0.748
L898_g4691 Steinernema monticolum L898_g4691 I 0.756
L898_g8573 Steinernema monticolum L898_g8573 I 0.819
L898_g9866 Steinernema monticolum L898_g9866 I 0.855
LOAG_00337 Loa loa LOAG_00337 I 0.764
LOAG_08615 Loa loa LOAG_08615 I 0.881
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.799
Myotis_brandtii_NR6A1_10025096 Myotis brandtii Myotis_brandtii_NR6A1_10025096 I 0.760
nAv.1.0.1.g03443 Acanthocheilonema viteae nAv.1.0.1.g03443 I 0.764
NBR_0001334401 Nippostrongylus brasiliensis NBR_0001334401 I 0.801
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.827
NBR_0001642901 Nippostrongylus brasiliensis NBR_0001642901 I 0.801
nDi.2.2.2.g01326 Dirofilaria immitis nDi.2.2.2.g01326 I 0.772
NECAME_08394 Necator americanus NECAME_08394 I 0.819
NECAME_09496 Necator americanus NECAME_09496 I 0.801
NEMVEDRAFT_v1g134436 Nematostella vectensis NEMVEDRAFT_v1g134436 I 0.805
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.753
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.771
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.794
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.848
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.881
nLs.2.1.2.g07992 Litomosoides sigmodontis nLs.2.1.2.g07992 I 0.764
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.879
nOo.2.0.1.g08426 Onchocerca ochengi nOo.2.0.1.g08426 I 0.764
NR5A1 Meleagris gallopavo ENSMGAG00000008342 I 0.760
NR5A1 Taeniopygia guttata ENSTGUG00000007170 I 0.760
NR6A1 Anolis carolinensis ENSACAG00000006870 I 0.760
NR6A1 Bos taurus ENSBTAG00000040585 I 0.760
NR6A1 Canis familiaris ENSCAFG00000020216 I 0.760
NR6A1 Callithrix jacchus ENSCJAG00000006631 I 0.760
NR6A1 Cavia porcellus ENSCPOG00000005970 I 0.760
NR6A1 Dasypus novemcinctus ENSDNOG00000017832 I 0.760
NR6A1 Equus caballus ENSECAG00000021324 I 0.760
NR6A1 Echinops telfairi ENSETEG00000012014 I 0.760
NR6A1 Felis catus ENSFCAG00000005507 I 0.760
NR6A1 Homo sapiens ENSG00000148200 D 0.760
NR6A1 Gallus gallus ENSGALG00000001073 I 0.760
NR6A1 Gorilla gorilla ENSGGOG00000009250 I 0.760
NR6A1 Loxodonta africana ENSLAFG00000011676 I 0.760
NR6A1 Microcebus murinus ENSMICG00000002911 I 0.760
NR6A1 Myotis lucifugus ENSMLUG00000014714 I 0.760
NR6A1 Macaca mulatta ENSMMUG00000011185 I 0.760
NR6A1 Monodelphis domestica ENSMODG00000019748 I 0.760
Nr6a1 Mus musculus ENSMUSG00000063972 I 0.760
NR6A1 Oryctolagus cuniculus ENSOCUG00000007599 I 0.760
NR6A1 Otolemur garnettii ENSOGAG00000030677 I 0.760
NR6A1 Ochotona princeps ENSOPRG00000016686 I 0.760
NR6A1 Pan troglodytes ENSPTRG00000021357 I 0.760
Nr6a1 Rattus norvegicus ENSRNOG00000013232 I 0.760
NR6A1 Tupaia belangeri ENSTBEG00000007008 I 0.760
NR6A1 Tursiops truncatus ENSTTRG00000017391 I 0.760
nr6a1 Xenopus tropicalis XB-GENE-487592 I 0.760
nr6a1a Danio rerio ENSDARG00000101508 I 0.760
nr6a1a Gasterosteus aculeatus ENSGACG00000003560 I 0.760
nr6a1a Tetraodon nigroviridis ENSTNIG00000010587 I 0.760
nr6a1a Takifugu rubripes ENSTRUG00000006306 I 0.760
Ocbimv22020378m.g Octopus bimaculoides Ocbimv22020378m.g I 0.757
OFLC_0000536201 Onchocerca flexuosa OFLC_0000536201 I 0.764
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.881
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.767
Ppa-unc-55 Pristionchus pacificus PPA04999 I 0.799
PPA06637 Pristionchus pacificus PPA06637 I 0.797
PPA21777 Pristionchus pacificus PPA21777 I 0.834
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.907
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.838
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.844
PTRK_0000497700 Parastrongyloides trichosuri PTRK_0000497700 I 0.771
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.920
PTRK_0000971200 Parastrongyloides trichosuri PTRK_0000971200 I 0.804
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.858
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.846
Pvit_08519 Pogona vitticeps Pvit_08519 I 0.760
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.775
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.804
Sakowv30002150m.g Saccoglossus kowalevskii Sakowv30002150m.g I 0.750
Sakowv30027208m.g Saccoglossus kowalevskii Sakowv30027208m.g I 0.747
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.812
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.841
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.826
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.794
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.844
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.812
SMAR013556 Strigamia maritima SMAR013556 I 0.749
Smp_174700 Schistosoma mansoni Smp_174700 I 0.767
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.825
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.751
SNAPOd2T00011859001 Oikopleura dioica SNAPOd2T00011859001 I 0.830
SNAPOd2T00013215001 Oikopleura dioica SNAPOd2T00013215001 I 0.840
SNAPOd2T00013219001 Oikopleura dioica SNAPOd2T00013219001 I 0.840
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.992
SPAL_0000110400 Strongyloides papillosus SPAL_0000110400 I 0.771
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.843
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.919
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.844
SPAL_0001408100 Strongyloides papillosus SPAL_0001408100 I 0.807
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.857
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.844
SPU_000749 Strongylocentrotus purpuratus SPU_000749 I 0.760
SROB_0001376101 Schistosoma rodhaini SROB_0001376101 I 0.767
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.857
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.920
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.849
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.756
SSTP_0000766500 Strongyloides stercoralis SSTP_0000766500 I 0.804
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.844
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.942
SSTP_0001234800 Strongyloides stercoralis SSTP_0001234800 I 0.771
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.844
SVE_0137400 Strongyloides venezuelensis SVE_0137400 I 0.771
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.844
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.857
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.844
SVE_1723700 Strongyloides venezuelensis SVE_1723700 I 0.807
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.848
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.919
TCLT_0000045701 Thelazia callipaeda TCLT_0000045701 I 0.764
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.886
TCNE_0001579701 Toxocara canis TCNE_0001579701 I 0.764
TELCIR_00680 Teladorsagia circumcincta TELCIR_00680 I 0.801
TsM_000004500 Taenia solium TsM_000004500 I 0.807
TTAC_0000076101 Hydatigera taeniaeformis TTAC_0000076101 I 0.806
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.879
WBGene00237444 Onchocerca volvulus WBGene00237444 I 0.764
XP_002159483.1 Hydra magnipapillata XP_002159483.1 I 0.756